RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SERPINI2O75830 405 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 PRNPP04156 253 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 ENO2P09104 434 aaPredicted RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 HNF4AP41235 474 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 USP39Q53GS9 565 aaKnown RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 USP6NLQ92738 828 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 MAF1Q9H063 256 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 MYADML2A6NDP7 307 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 ST3GAL1Q11201 340 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 ABRQ12979 859 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 PATL1Q86TB9 770 aaKnown RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 ACBD6Q9BR61 282 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 THEGQ9P2T0 379 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 TRHDEQ9UKU6 1024 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 UBXN8O00124 270 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 CYP3A5P20815 502 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 RPA3P35244 121 aaPredicted RBP13.96□□□□□ -0.18
SIX4-201ENST00000216513 LILRA4P59901 499 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 CCINQ13939 588 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 LPIN1Q14693 890 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 RNF168Q8IYW5 571 aaPredicted RBP13.96□□□□□ -0.18
SIX4-201ENST00000216513 ACTL9Q8TC94 416 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 IRF7Q92985 503 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 PDLIM2Q96JY6 352 aa13.96□□□□□ -0.18
SIX4-201ENST00000216513 EIF3LQ9Y262 564 aaKnown RBP13.96□□□□□ -0.18
SIX4-201ENST00000216513 TMEM265A0A087WTH1 108 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 A0A088AWK7 358 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 AKAP10O43572 662 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 ZNF10P21506 573 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 CYP2A13Q16696 494 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CACHD1Q5VU97 1274 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CIR1Q86X95 450 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 COL26A1Q96A83 441 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 RSPH9Q9H1X1 276 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 ABCB8Q9NUT2 735 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 TMEM51Q9NW97 253 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 ASTN1O14525 1302 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 GTPBP10A4D1E9 387 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 VAPBO95292 243 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 ANXA6P08133 673 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CST9Q5W186 159 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 CELF5Q8N6W0 485 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 FBXL18Q96ME1 805 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 TEPSINQ96N21 525 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CHCHD3Q9NX63 227 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 C3orf20Q8ND61 904 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 FBXO36Q8NEA4 188 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 BTN2A3PQ96KV6 586 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 FRMD8P1Q9BZ68 369 aaPredicted RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 LACRTQ9GZZ8 138 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 A0A0B4J269 797 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CLDN11O75508 207 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 ADH5P11766 374 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 SERPINH1P50454 418 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 STX3Q13277 289 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 SUZ12Q15022 739 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 CRY1Q16526 586 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 TUBB6Q9BUF5 446 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 SMG9Q9H0W8 520 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
SIX4-201ENST00000216513 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 EOGTQ5NDL2 527 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 CCT8L2Q96SF2 557 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 AHSPQ9NZD4 102 aa13.95□□□□□ -0.18
SIX4-201ENST00000216513 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ENPP3O14638 875 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 SPAG6O75602 509 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 MGAT1P26572 445 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 CCR4P51679 360 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 PDGFRLQ15198 375 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 AASDHQ4L235 1098 aaPredicted RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 DSELQ8IZU8 1212 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 VPS50Q96JG6 964 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 SLC38A3Q99624 504 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 GKN1Q9NS71 199 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 TACR2P21452 398 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 CXCR2P25025 360 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 TM4SF4P48230 202 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 ZNF470Q6ECI4 717 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ZSCAN18Q8TBC5 510 aaPredicted RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 RHOBTB2Q9BYZ6 727 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 CD84Q9UIB8 345 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.18
SIX4-201ENST00000216513 ABCB1P08183 1280 aaPredicted RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 CCNB1P14635 433 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 BPIFB1Q8TDL5 484 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 DNAJC28Q9NX36 388 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms