RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 QKIQ96PU8 341 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNU13-201ENST00000215956 ROPN1BQ9BZX4 212 aaPredicted RBP12.55□□□□□ -0.4
SNU13-201ENST00000215956 KLC2Q9H0B6 622 aa12.55□□□□□ -0.4
SNU13-201ENST00000215956 TKTL2Q9H0I9 626 aa12.55□□□□□ -0.4
SNU13-201ENST00000215956 ROPN1Q9HAT0 212 aaPredicted RBP12.55□□□□□ -0.4
SNU13-201ENST00000215956 ARHGEF4Q9NR80 690 aa12.55□□□□□ -0.4
SNU13-201ENST00000215956 ARHGEF38Q9NXL2 777 aa12.55□□□□□ -0.4
SNU13-201ENST00000215956 AGPSO00116 658 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 KCNN4O15554 427 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
SNU13-201ENST00000215956 IVLP07476 585 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 ARL4CP56559 192 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 COG7P83436 770 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
SNU13-201ENST00000215956 CCINQ13939 588 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 DDR2Q16832 855 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 CEP85LQ5SZL2 805 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
SNU13-201ENST00000215956 CCDC25Q86WR0 208 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 LZTR1Q8N653 840 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 GAB3Q8WWW8 586 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 PGLYRP2Q96PD5 576 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 SEPT5Q99719 369 aaPredicted RBP12.54□□□□□ -0.4
SNU13-201ENST00000215956 CATSPERBQ9H7T0 1116 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 PPCSQ9HAB8 311 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 SAE1Q9UBE0 346 aaPredicted RBP12.54□□□□□ -0.4
SNU13-201ENST00000215956 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
SNU13-201ENST00000215956 NUP205Q92621 2012 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 A0A1W2PQH9 124 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 H3BQF6 201 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 FGF10O15520 208 aaPredicted RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 RPP40O75818 363 aaKnown RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 KCNK5O95279 499 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 APOEP02649 317 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 TSHRP16473 764 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 AMPD1P23109 780 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 CDR1P51861 262 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 NRG1Q02297 640 aaPredicted RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 DPYSQ14117 519 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 PON2Q15165 354 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 UAP1Q16222 522 aaPredicted RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 AGBL2Q5U5Z8 902 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 NPNTQ6UXI9 565 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 SYNPOQ8N3V7 929 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 ZNF276Q8N554 614 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 TTC8Q8TAM2 541 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 TLR6Q9Y2C9 796 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 ZNF638Q14966 1978 aaKnown RBP12.53□□□□□ -0.4
SNU13-201ENST00000215956 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
SNU13-201ENST00000215956 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 DCLK1O15075 740 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 RIPK2O43353 540 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 GCATO75600 419 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ABHD2P08910 425 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 C1QTNF9P0C862 333 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 CSH1P0DML2 217 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 CSH2P0DML3 217 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ATP5DP30049 168 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 FDFT1P37268 417 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 PPP3CCP48454 512 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.4
SNU13-201ENST00000215956 SARNPP82979 210 aaKnown RBP12.52□□□□□ -0.4
SNU13-201ENST00000215956 ZNF33AQ06730 810 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.4
SNU13-201ENST00000215956 VEPH1Q14D04 833 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 PSAPL1Q6NUJ1 521 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 SCD5Q86SK9 330 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 KBTBD6Q86V97 674 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 TMC8Q8IU68 726 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 PDIK1LQ8N165 341 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ATP6V0D2Q8N8Y2 350 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 FAM76AQ8TAV0 307 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ADAM32Q8TC27 787 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 OLFM3Q96PB7 478 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 TTLL2Q9BWV7 592 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 LRRC3Q9BY71 257 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms