RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TRIM56Q9BRZ2 755 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 STMN4Q9H169 189 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ATXN3LQ9H3M9 355 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAN1C1Q9NR34 630 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ASAH2Q9NR71 780 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 UBP1Q9NZI7 540 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAD1L1Q9Y6D9 718 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MYLKQ15746 1914 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 POC1B-GALNT4F8VUJ3 575 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SCAMP3O14828 347 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CPP00450 1065 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CKMP06732 381 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GJA1P17302 382 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CDC25CP30307 473 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ACVRL1P37023 503 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CDH4P55283 916 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SERINC3Q13530 473 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 HNRNPDQ14103 355 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 EFTUD2Q15029 972 aaKnown RBP eCLIP20.06■□□□□ 0.86e-7■■■■■ 53.3
TNFRSF1A-201ENST00000162749 STXBP5Q5T5C0 1151 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 EXOC3L1Q86VI1 746 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TDRPQ86YL5 185 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 KLHDC8BQ8IXV7 354 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CYP4X1Q8N118 509 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 OR52K2Q8NGK3 314 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ATXN2LQ8WWM7 1075 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CFAP36Q96G28 342 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RETREG1Q9H6L5 497 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SP110Q9HB58 689 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RBM22Q9NW64 420 aaKnown RBP eCLIP20.06■□□□□ 0.87e-7■■■□□ 16.4
TNFRSF1A-201ENST00000162749 HCFC1R1Q9NWW0 138 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 LPXNO60711 386 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MYL4P12829 197 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CCR2P41597 374 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAGEA9P43362 315 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAGEA10P43363 369 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SESN2P58004 480 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CRADDP78560 199 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ZNF354CQ86Y25 554 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RIBC1Q8N443 379 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 OR52K1Q8NGK4 314 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SPATA22Q8NHS9 363 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GLOD4Q9HC38 313 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 FETUBQ9UGM5 382 aa20.05■□□□□ 0.8
TNFRSF1A-201ENST00000162749 A0A0D9SEW6 157 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SLC10A7Q0GE19 358 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 UNC5AQ6ZN44 842 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SPATS2Q86XZ4 545 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ARNTL2Q8WYA1 636 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PABPC5Q96DU9 382 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 FCRL5Q96RD9 977 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 A0A1B0GVM2 712 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TCAF2A6NFQ2 919 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SDR42E2A6NKP2 422 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CLDN11O75508 207 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 LATS1O95835 1130 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MT-CYBP00156 380 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 C1QAP02745 245 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 EPCAMP16422 314 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MGAT1P26572 445 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 IFNAR2P48551 515 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 NUMBP49757 651 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RENBPP51606 427 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GEMIN4P57678 1058 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 KLHL38Q2WGJ6 581 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 C6orf89Q6UWU4 347 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 Q6ZNB5 142 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ARHGEF2Q92974 986 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TGS1Q96RS0 853 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RASSF4Q9H2L5 321 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PPCSQ9HAB8 311 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SLC24A2Q9UI40 661 aa20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ATXN2Q99700 1313 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-201ENST00000162749 FOXO6A8MYZ6 492 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TSPAN3O60637 253 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 DRD4P21917 467 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SLC7A9P82251 487 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 IL10RBQ08334 325 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PRPSAP1Q14558 356 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 KBTBD12Q3ZCT8 623 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RTL10Q7L3V2 364 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MRRFQ96E11 262 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ZNF317Q96PQ6 595 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GCNAQ96QF7 691 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CYTH2Q99418 400 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 DDX50Q9BQ39 737 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 LRRC40Q9H9A6 602 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GGA2Q9UJY4 613 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 AAR2Q9Y312 384 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CLASP2O75122 1294 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 EPHA5P54756 1037 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RASA2Q15283 850 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MARC1Q5VT66 337 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CASC4Q6P4E1 433 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CHST9Q7L1S5 443 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 STAMBPL1Q96FJ0 436 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PAFAH2Q99487 392 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAGEH1Q9H213 219 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CASS4Q9NQ75 786 aa20.03■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SYBUQ9NX95 663 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms