RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Cyth1Q9QX11 398 aa31.08■■■□□ 2.57
Ctdnep1-201ENSMUST00000108593 Sgk1Q9WVC6 431 aa31.08■■■□□ 2.57
Ctdnep1-201ENSMUST00000108593 Dio2Q9Z1Y9 266 aa31.08■■■□□ 2.57
Ctdnep1-201ENSMUST00000108593 A0A286YCD0 109 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Gm5926E9PWJ8 236 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Klf1P46099 358 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 GsrP47791 500 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Atp5bP56480 529 aaKnown RBP31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 SbdsP70122 250 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Pebp1P70296 187 aaKnown RBP31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Atp8a1P70704 1164 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Cdk7Q03147 346 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 E2f5Q61502 335 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Elavl4Q61701 385 aaKnown RBP31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Six1Q62231 284 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 C8bQ8BH35 589 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Actl9Q8CG27 415 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Mkl1Q8K4J6 964 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ate1Q9Z2A5 516 aa31.07■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Chd7A2AJK6 2986 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 AspgA0JNU3 564 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Olfr742A2RTP5 311 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Frg1P97376 258 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Hsph1Q61699 858 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 MafkQ61827 156 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Jade3Q6IE82 823 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Pnma3Q8JZW8 466 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Papd4Q91YI6 484 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Rwdd4Q9CPR1 188 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Capn9Q9D805 690 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Magel2Q9QZ04 1284 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Bclaf3A2AG58 752 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Tubb1A2AQ07 451 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ism2D3Z6A3 493 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 DldO08749 509 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Arf5P84084 180 aaKnown RBP31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 PterQ60866 349 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Foxj1Q61660 421 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Tsga10Q6NY15 697 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Znf280cQ6P3Y5 742 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Olfr855Q7TRF8 312 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 CcnyQ8BGU5 341 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Fam118bQ8C569 351 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Uba6Q8C7R4 1053 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ccdc159Q8C963 411 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 MfrpQ8K480 584 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Cmtm8Q9CZR4 173 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Lat2Q9JHL0 203 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Mpp6Q9JLB0 553 aa31.06■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Apol7bB1AQP7 369 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Gm7073E9QAS1 335 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Sypl1O09117 261 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Hsd17b7O88736 334 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Lmf1Q3U3R4 574 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Armc7Q3UJZ3 198 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Cog7Q3UM29 770 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Apol7eQ3UZ24 369 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Six4Q61321 775 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Krt12Q64291 487 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Zbtb46Q8BID6 600 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Proser2Q8C5R2 471 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Fam227bQ9D518 532 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Vwa7Q9JHA8 891 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Unc80Q8BLN6 3261 aa31.05■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Atf6F6VAN0 656 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 5730507C01RikJ3QPX0 416 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Epha3P29319 983 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Eif3eP60229 445 aaKnown RBP31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 CamkmtQ3U2J5 323 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ephx3Q3V1F8 367 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Il10raQ61727 575 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Pja2Q80U04 707 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 CcinQ8CDE2 588 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Znf668Q8K2R5 619 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Serpina3nQ91WP6 418 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Usp11Q99K46 921 aa31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Riok3Q9DBU3 519 aaKnown RBP31.04■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Patl2A2ARM1 529 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Zfp952B0V2W4 504 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Sipa1P46062 1037 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Grm5Q3UVX5 1203 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Trim6Q8BGE7 488 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Cdc23Q8BGZ4 597 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ptk7Q8BKG3 1062 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Trmt10aQ8C1Z8 328 aaKnown RBP31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Wdr6Q99ME2 1125 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 LipfQ9CPP7 395 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Stk11Q9WTK7 436 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 AspmQ8CJ27 3122 aa31.03■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Nxpe3B9EKK6 559 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Gm7714E9Q079 131 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Speer2E9Q9U2 264 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Pik3cdO35904 1043 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Atp2a2O55143 1044 aaKnown RBP31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Slc7a2P18581 657 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Ap1m1P35585 423 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Cdh6P97326 790 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Lipo3Q3UT41 399 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 Tas2r102Q7M717 329 aa31.02■■■□□ 2.56
Ctdnep1-201ENSMUST00000108593 AmphQ7TQF7 686 aa31.02■■■□□ 2.56
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms