RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Nhsl2B1AXH1 854 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Adamts6D3Z1A5 1117 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ifi206G3UZV2 921 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Clcn6O35454 870 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Fgf10O35565 209 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Sdc4O35988 198 aaKnown RBP23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Hsd17b7O88736 334 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Elk3P41971 409 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Il12aP43431 215 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Pdcd1Q02242 288 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Pih1d3Q3KNI6 218 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Slc39a10Q6P5F6 833 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Stambpl1Q76N33 436 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Prss50Q8BLH5 439 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zfp449Q8CB76 518 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Lrp8Q924X6 996 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Cyp4v2Q9DBW0 525 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Asb3Q9WV72 525 aa23.12■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gm29133A0A1B0GT72 266 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zscan5bB2RTN3 468 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Vmn1r39G3UWE6 305 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 PenkP22005 268 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 ZfaP23607 742 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Nfkb1P25799 971 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Sox1P53783 391 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 PtpaP58389 323 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rab33aP97950 237 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tespa1Q3U132 458 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ggnbp1Q6K1E7 370 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Kctd13Q8BGV7 329 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Q8BHN7 327 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tmtc3Q8BRH0 920 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Caap1Q8VDY9 356 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Xpo6Q924Z6 1125 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 LrgukQ9D5S7 820 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tmed2Q9R0Q3 201 aa23.11■■□□□ 1.29
Scn1b-201ENSMUST00000098548 SpaarA0A1B0GSZ0 75 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Arfip1G5E8V9 373 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Dusp8O09112 663 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Coro1aO89053 461 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 FasP25446 327 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 CenpcP49452 906 aaKnown RBP23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zhx1P70121 873 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Smpdl3aP70158 445 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 1700061G19RikQ08EE8 705 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Trim71Q1PSW8 855 aaKnown RBP23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Fbxw2Q60584 422 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Hmgb4Q6P8W9 181 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Chmp2bQ8BJF9 213 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Nlrp4bQ8C6J9 863 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Nlrp10Q8CCN1 673 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Trpm8Q8R4D5 1104 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Reep3Q99KK1 254 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ssu72Q9CY97 194 aaKnown RBP23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mrps9Q9D7N3 390 aaKnown RBP23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Kdelc1Q9JHP7 502 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ccdc86Q9JJ89 426 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Pex11bQ9Z210 259 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gm29554A0A087WNW4 188 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Vmn2r27D3YUK6 857 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 BtkP35991 659 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Znrf3Q5SSZ7 913 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rtl3Q6P1Y1 553 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mgat5bQ765H6 792 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Slc39a4Q78IQ7 660 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 MroQ7TNB4 248 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Olfr26Q7TRB7 308 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mpp7Q8BVD5 576 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Asb14Q8C6Y6 587 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Usp27Q8CEG8 438 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 PvrQ8K094 408 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Atpaf2Q91YY4 289 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ndufa10Q99LC3 355 aaKnown RBP23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Znrf4Q9DAH2 327 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Olfr933Q9EQA0 308 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Neu2Q9JMH3 379 aa23.1■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Kcng2F7A6P6 480 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Sstr1P30873 391 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 PorP37040 678 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Pms2P54279 859 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Fmo3P97501 534 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tex35Q14BK3 207 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zbtb48Q1H9T6 681 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Agap2Q3UHD9 1186 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Fam81aQ3UXZ6 364 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Afap1l2Q5DTU0 825 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 AgmoQ8BS35 447 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rspry1Q8BVR6 576 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ago1Q8CJG1 857 aaKnown RBP23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ints9Q8K114 658 aaKnown RBP23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Smim14Q91VT8 99 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Syt12Q920N7 421 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mrps17Q9CQE3 120 aaKnown RBP23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 DtnaQ9D2N4 746 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Oser1Q9D722 291 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 XkQ9QXY7 446 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Sema4fQ9Z123 777 aa23.09■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Lonrf2B2RT44 518 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Dthd1E9PZX1 795 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ring1O35730 406 aa23.08■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms