RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Galnt5Q8C102 930 aa10.6□□□□□ -0.71
Ldb3-205ENSMUST00000090040 ClmnQ8C5W0 1052 aa10.6□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Btbd9Q8C726 612 aa10.6□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Psmd9Q9CR00 222 aa10.6□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Ppil6Q9D6D8 278 aa10.6□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Cylc2B1AWN8 422 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm11239E9Q5Z9 360 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm11237F2Z3W5 360 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm11238F2Z478 360 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Vmn1r39G3UWE6 305 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Rpl21O09167 160 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Scd1P13516 355 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 PenkP22005 268 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Serping1P97290 504 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm428Q3UTE2 360 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 PdgfrlQ6PE55 375 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Ppm1nQ8BGL1 404 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Usp1Q8BJQ2 784 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Rxfp2Q91ZZ5 737 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Zfp655Q9CZP3 541 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Maged2Q9ER67 616 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Apobec2Q9WV35 224 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Bcorl1A2AQH4 1781 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Pdzd8B9EJ80 1147 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm5930D3Z257 264 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Olfr726E9Q8X3 321 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 ShdO88834 343 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Olfr725Q05A45 321 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm136Q3V037 328 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Tbc1d1Q60949 1255 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Nup54Q8BTS4 510 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Traf3ip2Q8N7N6 555 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Prrg2Q8R182 198 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Eml3Q8VC03 897 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 PygmQ9WUB3 842 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Polr2aP08775 1970 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Adamts6D3Z1A5 1117 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 E030030I06RikJ3QML9 246 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Gm7942L7N277 499 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Enpp1P06802 906 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Vav1P27870 845 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Kcnj2P35561 428 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Vps45P97390 570 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Acbd5Q5XG73 508 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Aldh1a2Q62148 518 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Nlrp4fQ66X05 959 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Casc4Q6P2L7 435 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 4932411N23RikQ8C0S0 470 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Mettl3Q8C3P7 580 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Lpin1Q91ZP3 924 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Trim16Q99PP9 556 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Atg7Q9D906 698 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Piwil1Q9JMB7 862 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Cpxm1Q9Z100 722 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Tmem45a2B7ZWJ5 289 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Vmn2r84D3YWE3 849 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 CkmP07310 381 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Lsp1P19973 330 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 AcrP23578 436 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Msh2P43247 935 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Hoxb13P70321 286 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Itih3Q61704 889 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Utp14bQ6EJB6 756 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 DgkqQ6P5E8 934 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Naaladl1Q7M758 745 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Vtcn1Q7TSP5 283 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Trpa1Q8BLA8 1125 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Smad3Q8BUN5 425 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Wnt9aQ8R5M2 365 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Commd8Q9CZG3 183 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Mfsd10Q9D2V8 456 aaKnown RBP10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Psmd12Q9D8W5 456 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 NumbQ9QZS3 653 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Spint1Q9R097 507 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 Cyb561d2Q9WUE3 222 aa10.59□□□□□ -0.71
Ldb3-205ENSMUST00000090040 A0A1Y7VP24 259 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Fam171a2A2A699 822 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Gm12800B1AUV4 484 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Kcnt2D3Z649 1135 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Gm10719E9Q7T3 227 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Gm12794L7MTS5 483 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Fzd1O70421 642 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 P01652 108 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Rfx2P48379 717 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 CenpcP49452 906 aaKnown RBP10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Krt6aP50446 553 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Ndst2P52850 883 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Epb41l5Q8BGS1 731 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Ostm1Q8BGT0 338 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Neu4Q8BZL1 478 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Vps37aQ8CHS8 397 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Pgm1Q9D0F9 562 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Clca1Q9D7Z6 913 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Ccdc97Q9DBT3 340 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Dcun1d1Q9QZ73 259 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Sdccag3A2AIW0 432 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Ap2a1P17426 977 aaKnown RBP10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Tap1P21958 724 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 PtpaP58389 323 aa10.58□□□□□ -0.72
Ldb3-205ENSMUST00000090040 Zbtb14Q08376 449 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms