RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Sirt2Q8VDQ8 389 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ttc39cQ8VE09 580 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ssxb1Q9CPU1 170 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ggt5Q9Z2A9 573 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Gm21149A0A0G2JFY7 255 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 NuggcD3YWJ0 796 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Bmp2P21274 394 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Pabpc1P29341 636 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Serac1Q3U213 654 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Adam6bQ6IMH7 756 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Rxfp1Q6R6I7 758 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Gm9758Q80ZT2 255 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Nipal1Q8BMW7 416 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Trim14Q8BVW3 440 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Anapc2Q8BZQ7 837 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ccdc17Q8CE13 565 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Mcfd2Q8K5B2 145 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 TfQ921I1 697 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ppp1r16aQ923M0 524 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Sec14l2Q99J08 403 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Zfp64Q99KE8 643 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Eif2b2Q99LD9 351 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 RptorQ8K4Q0 1335 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Myl4P09541 193 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Q32P12 615 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ifi47Q61635 420 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Plppr4Q7TME0 766 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Wscd1Q80XH4 572 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Spdye4bQ8CDE8 236 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Olfr784Q8VFZ9 319 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Olfr1353Q8VGU8 309 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Gria4Q9Z2W8 902 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 RxrgP28705 463 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 YwhaqP68254 245 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 C1orf109Q499E6 217 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Nr1h2Q60644 446 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 TsnQ62348 228 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Enpp4Q8BTJ4 456 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 CpzQ8R4V4 654 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 5530400C23RikQ9D3I0 173 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Zcchc11B2RX14 1644 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Usp32F8VPZ3 1604 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Slurp2P0DP59 97 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Rpl5P47962 297 aaKnown RBP9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Anxa4P97429 319 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Cyb5d1Q5NCY3 228 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Awat2Q6E1M8 333 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Camk1dQ8BW96 385 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Caskin2Q8VHK1 1201 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ndufs2Q91WD5 463 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Nrif2Q921B4 824 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Lrrc40Q9CRC8 602 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Rec114Q9CWH4 259 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Nudt14Q9D142 222 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Dus2Q9D7B1 493 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 AcadsbQ9DBL1 432 aa9.97□□□□□ -0.81
Syne1-201ENSMUST00000041639 Umodl1Q5DID3 1319 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Glb1P23780 647 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Mxd1P50538 227 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Lsm3P62311 102 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Kcnq1P97414 668 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Sox8Q04886 464 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Muc3aQ3U5A2 218 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 E2f5Q61502 335 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Eif2s1Q6ZWX6 315 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Reep1Q8BGH4 201 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Tmco6Q8BQX5 494 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Snx15Q91WE1 337 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Dctn2Q99KJ8 402 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Sh3bp5lQ99LH9 392 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Snrpb2Q9CQI7 225 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Fam45aQ9D8N2 357 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Hmg20aQ9DC33 346 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Drg2Q9QXB9 364 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 S1pr4Q9Z0L1 386 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Mroh1E0CZ22 1640 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Sdc4O35988 198 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Lire1P11260 357 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Pdap1Q3UHX2 181 aaKnown RBP9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ca4Q64444 305 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Gga2Q6P5E6 603 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 PapolgQ6PCL9 739 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 PolnQ7TQ07 864 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Olfr792Q7TRH9 311 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Snapc1Q8K0S9 389 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 DolkQ8R2Y3 534 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Lars2Q8VDC0 902 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 PorcnQ9JJJ7 461 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Trpc4apQ9JLV2 797 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Piwil1Q9JMB7 862 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Pgbd1E9Q492 415 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 1700061G19RikQ08EE8 705 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Cyp3a11Q64459 504 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Klhl23Q6GQU2 558 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 C6.1alQ7M757 291 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Arhgap12Q8C0D4 838 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Ergic3Q9CQE7 383 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Lrrc57Q9D1G5 239 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Hipk3Q9ERH7 1192 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Wnt8bQ9WUD6 350 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms