RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ndufs3Q9DCT2 263 aaKnown RBP12.24□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Vwa7Q9JHA8 891 aa12.24□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm13101A2ASJ0 481 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm10720D3Z1I5 223 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm10717D3Z1I8 228 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 XntrpcF8VQM8 1264 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm10250G3X9L6 160 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Hspa9P38647 679 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ripk2P58801 539 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ldb1P70662 411 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ccdc50Q810U5 305 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Slc43a1Q8BSM7 564 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 LipmQ8K2A6 422 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Pramel1Q99MW3 458 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 MutyhQ99P21 515 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Atp5hQ9DCX2 161 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 AatfQ9JKX4 526 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ptk2bQ9QVP9 1009 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Trpc2Q9R244 1172 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 HnrnpcQ9Z204 313 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm28360A0A087WR25 190 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Klhdc7bA0A286YD60 1263 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Patl2A2ARM1 529 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tsc22d2E9Q7M2 769 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Impdh2P24547 514 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Aldh3a1P47739 453 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Trim75Q3UWZ0 467 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Dalrd3Q6PJN8 538 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tecpr1Q80VP0 1166 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Trmt10aQ8C1Z8 328 aaKnown RBP12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Wdr26Q8C6G8 641 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Art3Q8R2G4 371 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Homer3Q99JP6 356 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Sdcbp2Q99JZ0 292 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ergic2Q9CR89 377 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Serpinb6cW4VSP4 379 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 A630010A05RikA9C473 232 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Cacna2d1O08532 1103 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Kpna3O35344 521 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Hk1P17710 974 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 PnpP23492 289 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 RxraP28700 467 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Krt2Q3TTY5 707 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ntrk1Q3UFB7 799 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tnfaip2Q61333 691 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 GkQ64516 559 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Rasa4Q6PFQ7 802 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Klhl17Q6TDP3 640 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Zfp719Q8BIV1 735 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Q8BP99 230 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Pcdhb13Q91Y06 796 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Dnajc3Q91YW3 504 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Reep3Q99KK1 254 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Txndc12Q9CQU0 170 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Hddc3Q9D114 179 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Galk1Q9R0N0 392 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Mbd1Q9Z2E2 636 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Vmn2r4K7N784 913 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Nt5dc3Q3UHB1 546 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Rcsd1Q3UZA1 412 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Usp7Q6A4J8 1103 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Fam126aQ6P9N1 521 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Cd300aQ6SJQ0 318 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Q80WR5 230 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Creb3l2Q8BH52 521 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 TxlngQ8BHN1 524 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Q8CIL4 281 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Stx19Q8R1Q0 292 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Catsper1Q91ZR5 686 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tex46Q9CPU3 165 aa12.23□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Cacna1dQ99246 2179 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Gm13119B1ARV5 481 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Olfr731F8VQB9 326 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 GfapP03995 430 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 GcP21614 476 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Msr1P30204 458 aaKnown RBP12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Aff3P51827 1254 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 DhpsQ3TXU5 369 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Nutm2Q3V0C3 733 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 PdgfrlQ6PE55 375 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Mapk15Q80Y86 549 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ago1Q8CJG1 857 aaKnown RBP12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Brd8Q8R3B7 951 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Nae1Q8VBW6 534 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tm4sf4Q91XD3 202 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Ino80bQ99PT3 375 aaKnown RBP12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tmem115Q9WUH1 350 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Mrgpra2aA0A0R4J1Z0 331 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Card9A2AIV8 536 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 H2-Q2Q4KN81 360 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Zfp91Q62511 572 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Arhgap11aQ80Y19 987 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Rdh13Q8CEE7 334 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tp53inp2Q8CFU8 221 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Acsl5Q8JZR0 683 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 MtrexQ9CZU3 1040 aaKnown RBP12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 TtpalQ9D3D0 343 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 Tchhl1Q9D3P1 638 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 CdylQ9WTK2 593 aa12.22□□□□□ -0.45
Ctr9-201ENSMUST00000005749 H2afb2S4R1M3 115 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms