RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Btbd35f6J3QMW9 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f26J3QNK2 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f24J3QNQ5 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f8J3QQ50 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f17L7MU81 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f18L7MU83 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f14Q1LZI5 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Zfp217Q3U0X6 1041 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tespa1Q3U132 458 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fam189a2Q4FZH1 290 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f27Q5FWA1 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Slc36a3Q811P0 477 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Znf784Q8BI69 297 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Slc41a1Q8BJA2 512 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dis3lQ8C0S1 1053 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr30Q8VGD8 315 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 GMCL1P1Q99N64 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gucy2dA0A0U1RPR8 1117 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm6657A0A1B0GRJ3 277 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 FgaE9PV24 789 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Erich2E9Q1A6 463 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Hmgxb3G3X9M3 1254 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 DmpkP54265 631 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Adcyap1r1P70205 496 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Arhgap1Q5FWK3 439 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Nlrp9cQ66X01 1004 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Nrg1Q6DR99 700 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Arrdc3Q7TPQ9 414 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cog2Q921L5 731 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Lysmd3Q99LE3 305 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Echdc3Q9D7J9 300 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gbp6A0A0G2JDV3 611 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm21731A0A286YDE9 180 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dnmt3bO88509 859 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 UmpsP13439 481 aaKnown RBP16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 LdlrP35951 862 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Krt6aP50446 553 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sorbs2Q3UTJ2 1180 aaKnown RBP16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Trim67Q505D9 768 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Abhd15Q5F2F2 459 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tmem130Q6NXM3 419 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sez6lQ6P1D5 963 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ints6lQ8BND4 861 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pcolce2Q8R4W6 414 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tfap2dQ91ZK0 452 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rnaseh2aQ9CWY8 301 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 PirQ9D711 290 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Psmd12Q9D8W5 456 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Itgb1bp2Q9R000 350 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cdh22Q9WTP5 813 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 GghQ9Z0L8 317 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Shcbp1Q9Z179 668 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gjd2O54851 321 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Scg3P47867 471 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Akr1c6P70694 323 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ano7Q14AT5 859 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 HdxQ14B70 692 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Lrrc74bQ14BP6 391 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fam160a1Q505K2 1081 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Trim38Q5SZ99 471 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fcrl5Q68SN8 596 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rnf38Q8BI21 518 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pak5Q8C015 719 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Atxn7l2Q8C8K6 696 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tcaf2Q921K8 919 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sytl2Q99N50 950 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Q9D9D9 101 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rnf138rt1Q9D9M9 248 aa16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Stap1Q9JM90 297 aaKnown RBP16.47■□□□□ 0.23
Trim28-201ENSMUST00000005705 Atxn10P28658 475 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ripply1Q2WG77 201 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gpd1lQ3ULJ0 351 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ecm1Q61508 559 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 GapdhsQ64467 440 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gpsm1Q6IR34 673 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tigd3Q7TM95 470 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Got1l1Q7TSV6 404 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Echs1Q8BH95 290 aaKnown RBP16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Daam1Q8BPM0 1077 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ppp4r4Q8C0Y0 875 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ccdc90bQ8C3X2 256 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ampd2Q9DBT5 798 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 MecrQ9DCS3 373 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ruvbl2Q9WTM5 463 aaKnown RBP16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Kcnd2Q9Z0V2 630 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Myo7aP97479 2215 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm15155B1B034 138 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Vmn2r44L7N2E1 861 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Bub1O08901 1058 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Arpp19P56212 112 aaKnown RBP16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ak8Q32M07 479 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fam91a1Q3UVG3 837 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Akap14Q3V0I7 536 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 DcstampQ7TNJ0 470 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr533Q7TRT7 320 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cdkn3Q810P3 211 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Znf385bQ8BXJ8 482 aaKnown RBP16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Adprhl2Q8CG72 370 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Adam32Q8K410 754 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tspan14Q8QZY6 270 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms