RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CUL3Q13618 768 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 NAIF1Q69YI7 327 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-223ENST00000641597 ZNF280DQ6N043 979 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 ISLR2Q6UXK2 745 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 KCNMB4Q86W47 210 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 SLC26A7Q8TE54 656 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 LRRC40Q9H9A6 602 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 FBXW11Q9UKB1 542 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 GABRB3P28472 473 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 PPIDQ08752 370 aaKnown RBP17.16■□□□□ 0.34
PHGDH-223ENST00000641597 CCNIQ14094 377 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 DNAL1Q4LDG9 190 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 SPANXN3Q5MJ09 141 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 FOXB2Q5VYV0 432 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 RWDD4Q6NW29 188 aaKnown RBP17.16■□□□□ 0.34
PHGDH-223ENST00000641597 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-223ENST00000641597 DENND6AQ8IWF6 608 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 SCAMP5Q8TAC9 235 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 VPS39Q96JC1 886 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 ANKRD27Q96NW4 1050 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 TMEM209Q96SK2 561 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 GATA5Q9BWX5 397 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-223ENST00000641597 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 CASS4Q9NQ75 786 aa17.16■□□□□ 0.34
PHGDH-223ENST00000641597 MYADML2A6NDP7 307 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 KIF1CO43896 1103 aaKnown RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 SBK3P0C264 359 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 ITGAXP20702 1163 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 EPHA3P29320 983 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 HARS2P49590 506 aaKnown RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 CTBP1Q13363 440 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 POU6F1Q14863 301 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 TRMT5Q32P41 509 aaKnown RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 GRTP1Q5TC63 336 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 KCTD13Q8WZ19 329 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 NDFIP2Q9NV92 336 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 ZNF212Q9UDV6 495 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 DFFAO00273 331 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 GARSP41250 739 aaKnown RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 ATXN3P54252 364 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 MPP3Q13368 585 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 TAC4Q86UU9 113 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 CCNJLQ8IV13 435 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 PPFIBP2Q8ND30 876 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 OR6Y1Q8NGX8 325 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 ZSCAN18Q8TBC5 510 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-223ENST00000641597 OMDQ99983 421 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 NDE1Q9NXR1 346 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 ADAMTS6Q9UKP5 1117 aa17.15■□□□□ 0.34
PHGDH-223ENST00000641597 EME2A4GXA9 379 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 F8W8V4 182 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 LIN7AO14910 233 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SKIP12755 728 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SPRP35270 261 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SERPINB8P50452 374 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SCNN1GP51170 649 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 MPP1Q00013 466 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 NOMO2Q5JPE7 1267 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 OR52E8Q6IFG1 317 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 GBA3Q9H227 469 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 WDCPQ9H6R7 721 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 NMRAL1Q9HBL8 299 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 TMLHEQ9NVH6 421 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SLC2A6Q9UGQ3 507 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 TMEM233B4DJY2 109 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 HHLA1C9JL84 531 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 MSI1O43347 362 aaKnown RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 MX2P20592 715 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 BDNFP23560 247 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 MAGEA12P43365 314 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 CDC16Q13042 620 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 CLEC14AQ86T13 490 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 TMEM151AQ8N4L1 468 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 RNF148Q8N7C7 305 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 TDRD5Q8NAT2 981 aaKnown RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 KCTD4Q8WVF5 259 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 SGF29Q96ES7 293 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 LENG8Q96PV6 779 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-223ENST00000641597 NAT9Q9BTE0 207 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 EBF3Q9H4W6 596 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 TASP1Q9H6P5 420 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 PCDHB12Q9Y5F1 795 aa17.14■□□□□ 0.33
PHGDH-223ENST00000641597 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
PHGDH-223ENST00000641597 ZNF865P0CJ78 1059 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-223ENST00000641597 GRK2P25098 689 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 MRPS35P82673 323 aaKnown RBP17.13■□□□□ 0.33
PHGDH-223ENST00000641597 SLC41A1Q8IVJ1 513 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 RNF34Q969K3 372 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 FERMT1Q9BQL6 677 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 CDH19Q9H159 772 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 AURKAO14965 403 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 XPOTO43592 962 aaKnown RBP17.13■□□□□ 0.33
PHGDH-223ENST00000641597 BRCC3P46736 316 aa17.13■□□□□ 0.33
PHGDH-223ENST00000641597 CDK18Q07002 472 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms