RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TIAM2Q8IVF5 1701 aa3.58□□□□□ -1.84
ATM-230ENST00000640388 N4BP2Q86UW6 1770 aaPredicted RBP3.58□□□□□ -1.84
ATM-230ENST00000640388 PAPPA2Q9BXP8 1791 aa3.58□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3DA0A087WVF3 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3IA0A087WXS9 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3EA0A087X179 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3KA0A087X1G2 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3BA6NDS4 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3FA6NER0 549 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3LB9A6J9 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TRIM38O00635 465 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 PPP6R2O75170 966 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 CNOT3O75175 753 aaKnown RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 CNTN5O94779 1100 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 BMP15O95972 392 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ITGA2BP08514 1039 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TMEM191BP0C7N4 346 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3HP0C7X1 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 GRK5P34947 590 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ME1P48163 572 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 FAM3BP58499 235 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 TAS2R50P59544 299 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 SHC2P98077 582 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 AKAP12Q02952 1782 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TLE3Q04726 772 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ICA1Q05084 483 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TROQ12816 1431 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 SF3A3Q12874 501 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATM-230ENST00000640388 MTX1Q13505 466 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 EPHA10Q5JZY3 1008 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ATPAF1Q5TC12 328 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3GQ6DHY5 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3CQ6IPX1 549 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 MUC6Q6W4X9 2439 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 RBBP6Q7Z6E9 1792 aaKnown RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 TBC1D3Q8IZP1 549 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 SPICE1Q8N0Z3 855 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 SAMD3Q8N6K7 520 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 WIPF2Q8TF74 440 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 HMGB4Q8WW32 186 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ZFYVE19Q96K21 471 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 TUBB6Q9BUF5 446 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 KATNAL1Q9BW62 490 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 BRD8Q9H0E9 1235 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 FOXP1Q9H334 677 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 TAGLN3Q9UI15 199 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 CNTN6Q9UQ52 1028 aa3.57□□□□□ -1.84
ATM-230ENST00000640388 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.57□□□□□ -1.84
ATM-230ENST00000640388 ARFGEF1Q9Y6D6 1849 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ITSN1Q15811 1721 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 CRYBG1Q9Y4K1 1723 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 GCC2Q8IWJ2 1684 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 LY6G6EA0A0G2JKS1 128 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A18PA6NE21 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A16PA6NEW6 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 C3orf70A6NLC5 250 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A9PA6NNJ1 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A5PA8MXJ8 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 F8W810 466 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ACTL6BO94805 426 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 LARGE1O95461 756 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 SGPL1O95470 568 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ALDOAP04075 364 aaKnown RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 CYP3A4P08684 503 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ALDOCP09972 364 aaKnown RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A15PP0C7V4 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM90A14PP0C7W9 464 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 TGM2P21980 687 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FOXL2P58012 376 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 CHAF1AQ13111 956 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 MORC3Q14149 939 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 ZNF474Q6S9Z5 364 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 KLHL17Q6TDP4 642 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 IRF2BP2Q7Z5L9 587 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ADGRF3Q8IZF5 1079 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 FAM47BQ8NA70 645 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ADPRHL1Q8NDY3 354 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ZNF548Q8NEK5 533 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 POF1BQ8WVV4 589 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ZFPM2Q8WW38 1151 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 RSC1A1Q92681 617 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ZBTB9Q96C00 473 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 EID2BQ96D98 161 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ZNF347Q96SE7 839 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 RTKNQ9BST9 563 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 TRMOQ9BU70 441 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 OSBPL5Q9H0X9 879 aaPredicted RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 SFXN1Q9H9B4 322 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 ERVK-5Q9HDB9 667 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 PAPOLBQ9NRJ5 636 aaKnown RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 POT1Q9NUX5 634 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATM-230ENST00000640388 DACT1Q9NYF0 836 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 HERC5Q9UII4 1024 aaKnown RBP3.56□□□□□ -1.84
ATM-230ENST00000640388 SLC8A2Q9UPR5 921 aa3.56□□□□□ -1.84
ATM-230ENST00000640388 HS3ST3B1Q9Y662 390 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms