RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 A0A0B4J269 797 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 ANO9A1A5B4 782 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 C5orf67F2Z3F1 127 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 F8W810 466 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 H3BNC9 293 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 O00370 1275 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 PTGESO14684 152 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 MAPK13O15264 365 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 FOXS1O43638 330 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 RECQL4O94761 1208 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 PIGRP01833 764 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 H2AFZP0C0S5 128 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 ABCB4P21439 1286 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 TNFAIP3P21580 790 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 PROZP22891 400 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 FLT3P36888 993 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 SLC11A1P49279 550 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 CARSP49589 748 aaKnown RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 LIG4P49917 911 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 EPHA5P54756 1037 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 BCAR1P56945 870 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 POU5F1Q01860 360 aaKnown RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 RNASELQ05823 741 aaKnown RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 CAMK1Q14012 370 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 DCAF4L1Q3SXM0 396 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 GLRA4Q5JXX5 417 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 DAB2IPQ5VWQ8 1189 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 H2AFVQ71UI9 128 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 TMEM173Q86WV6 379 aaPredicted RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 DDX42Q86XP3 938 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATM-229ENST00000639953 LRRC43Q8N309 656 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 GPD1LQ8N335 351 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 RNF10Q8N5U6 811 aaKnown RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 GSTCDQ8NEC7 633 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 URGCPQ8TCY9 931 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 RIN2Q8WYP3 895 aaPredicted RBP6.36□□□□□ -1.39
ATM-229ENST00000639953 SHC3Q92529 594 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 LRRC37BQ96QE4 947 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 SPAG5Q96R06 1193 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 PAAF1Q9BRP4 392 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 TCHPQ9BT92 498 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 SDCBP2Q9H190 292 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 ISCUQ9H1K1 167 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 VPS11Q9H270 941 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 GIT1Q9Y2X7 761 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 NUB1Q9Y5A7 615 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 CITO14578 2027 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 ANK1P16157 1881 aa6.36□□□□□ -1.39
ATM-229ENST00000639953 MYO9BQ13459 2157 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 ESYT3A0FGR9 886 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 CASTOR2A6NHX0 329 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 ZNF839A8K0R7 811 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 TMEM110-MUSTN1A8MSY1 372 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 H0YCG3 227 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 NRP1O14786 923 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 HNRNPDLO14979 420 aaKnown RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 PMM2O15305 246 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 POLR3GO15318 223 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 CLDN3O15551 220 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 RAD51CO43502 376 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 EXTL3O43909 919 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 TOM1L1O75674 476 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 FGF18O76093 207 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 FTLP02792 175 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 GALTP07902 379 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 ZNF888P0CJ79 500 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 DLATP10515 647 aaKnown RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 MCF2P10911 925 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 KRT13P13646 458 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 LAG3P18627 525 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 ECHS1P30084 290 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 ACVRL1P37023 503 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 USP8P40818 1118 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 OR1G1P47890 313 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 MXI1P50539 228 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 NAP1L1P55209 391 aaKnown RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 MCL1Q07820 350 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 IFRD2Q12894 506 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 PTP4A2Q12974 167 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 PSMD6Q15008 389 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 BRD3Q15059 726 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 LLGL1Q15334 1064 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 SIX1Q15475 284 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 FAM182AQ5T1J6 154 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 TCTN3Q6NUS6 607 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 INTS8Q75QN2 995 aaKnown RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 ADGRD2Q7Z7M1 963 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 EFCAB13Q8IY85 973 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 COLGALT2Q8IYK4 626 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 HACE1Q8IYU2 909 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 SLC39A11Q8N1S5 342 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 WDTC1Q8N5D0 677 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 TRIM58Q8NG06 486 aa6.35□□□□□ -1.39
ATM-229ENST00000639953 MAFAQ8NHW3 353 aaPredicted RBP6.35□□□□□ -1.39
ATM-229ENST00000639953 SPPL3Q8TCT6 385 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms