RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	VPS51	Q9UID3	782 aa		0.85	□□□□□ -2.27
LMBR1-222	ENST00000638959	B3GNT3	Q9Y2A9	372 aa		0.85	□□□□□ -2.27
LMBR1-222	ENST00000638959	RAP2C	Q9Y3L5	183 aa		0.85	□□□□□ -2.27
LMBR1-222	ENST00000638959	COL15A1	P39059	1388 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	PCDH7	O60245	1069 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	MYF5	P13349	255 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CPE	P16870	476 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	PDC	P20941	246 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CHRNA5	P30532	468 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CDH12	P55289	794 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	MYBPC2	Q14324	1141 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	ACOX1	Q15067	660 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CT47A1	Q5JQC4	288 aa	Predicted RBP	0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	EFCAB2	Q5VUJ9	269 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	HIBCH	Q6NVY1	386 aa	Predicted RBP	0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	AAGAB	Q6PD74	315 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	AFAP1L2	Q8N4X5	818 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	METTL27	Q8N6F8	245 aa	Predicted RBP	0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	SLC24A4	Q8NFF2	622 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CEP76	Q8TAP6	659 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	LNX1	Q8TBB1	728 aa	Predicted RBP	0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	WDR66	Q8TBY9	1149 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF473	Q8WTR7	871 aa	Known RBP	0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CDK5RAP3	Q96JB5	506 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	C18orf12	Q96KH6	178 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	CHST11	Q9NPF2	352 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	TMEM160	Q9NX00	188 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	LRFN1	Q9P244	771 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	STAP2	Q9UGK3	403 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	HDAC9	Q9UKV0	1011 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	VDAC3	Q9Y277	283 aa		0.84	□□□□□ -2.27
LMBR1-222	ENST00000638959	ATXN2	Q99700	1313 aa	Known RBP	0.84	□□□□□ -2.28
LMBR1-222	ENST00000638959	COL16A1	Q07092	1604 aa	Predicted RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	TRBV5-7	A0A0A0MS05	114 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	AQP7P3	A6NL99	342 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KDM4E	B2RXH2	506 aa	Predicted RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	RAB27B	O00194	218 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	MARCH6	O60337	910 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KDM4B	O94953	1096 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	CH25H	O95992	272 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	INHBA	P08476	426 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	TPH1	P17752	444 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	EN2	P19622	333 aa	Predicted RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	MCM3	P25205	808 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	CTTN	Q14247	550 aa	Known RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KCNAB1	Q14722	419 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	SF3A1	Q15459	793 aa	Known RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC25A30	Q5SVS4	291 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KCNH5	Q8NCM2	988 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	OR56A3	Q8NH54	315 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZPLD1	Q8TCW7	415 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	KBTBD7	Q8WVZ9	684 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	IP6K1	Q92551	441 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	FIG4	Q92562	907 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	RFT1	Q96AA3	541 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	MOCOS	Q96EN8	888 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	DNAJC2	Q99543	621 aa	Known RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	CAAP1	Q9H8G2	361 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	A1CF	Q9NQ94	594 aa	Known RBP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	SMARCAL1	Q9NZC9	954 aa		0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	0.83	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A0G2JPF8	293 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A1B0GVM2	712 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959		A6NNZ2	444 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	HNRNPCL3	B7ZW38	293 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	KIF3B	O15066	747 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	HNRNPCL1	O60812	293 aa	Known RBP	0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	EDN1	P05305	212 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	HNRNPA1	P09651	372 aa	Known RBP eCLIP	0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	HNRNPCL4	P0DMR1	293 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	IGHV4-30-4	P0DP06	118 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	MYBL2	P10244	700 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	CD53	P19397	219 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	MMP8	P22894	467 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	SSTR2	P30874	369 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	RPL3	P39023	403 aa	Known RBP	0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	IL15	P40933	162 aa	Predicted RBP	0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	LIFR	P42702	1097 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	CPT1A	P50416	773 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	ARFIP2	P53365	341 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC37A1	P57057	533 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM187	Q14656	261 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	PGS1	Q32NB8	556 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	INAVA	Q3KP66	663 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC35E4	Q6ICL7	350 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	MZT2A	Q6P582	158 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	NHLRC1	Q6VVB1	395 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959		Q6ZR54	194 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	DSG4	Q86SJ6	1040 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM163	Q8TC26	289 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	GLMP	Q8WWB7	406 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	THAP4	Q8WY91	577 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZDHHC12	Q96GR4	267 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF333	Q96JL9	665 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	TTC14	Q96N46	770 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	FAM83D	Q9H4H8	585 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZIM2	Q9NZV7	527 aa		0.82	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC45A1	Q9Y2W3	748 aa		0.82	□□□□□ -2.28

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