RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 UBTFL6P0CB48 400 aaPredicted RBP12.98□□□□□ -0.33
TCF4-289ENST00000637941 GNAT1P11488 350 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 UQCRBP14927 111 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 GTF2A2P52657 109 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 DAOAP59103 153 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 GALNT2Q10471 571 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 PRKAA1Q13131 559 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 HSP90AA5PQ58FG0 334 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 LIPMQ5VYY2 423 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 SEL1L3Q68CR1 1132 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 ZYG11AQ6WRX3 759 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 FRMD7Q6ZUT3 714 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 TMEM86AQ8N2M4 240 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 GALNT15Q8N3T1 639 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 CATSPER1Q8NEC5 780 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 VPS39Q96JC1 886 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 BTBD9Q96Q07 612 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
TCF4-289ENST00000637941 C6orf203Q9P0P8 240 aaPredicted RBP12.98□□□□□ -0.33
TCF4-289ENST00000637941 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 PDHXO00330 501 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 HDAC3O15379 428 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 PDE5AO76074 875 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 GLDCP23378 1020 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 LHX1P48742 406 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 KPNA2P52292 529 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 SNX17Q15036 470 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 CCL15Q16663 113 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 ZFP1Q6P2D0 407 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 TMEM126BQ8IUX1 230 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 TNS4Q8IZW8 715 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 PLD6Q8N2A8 252 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 ICA1LQ8NDH6 482 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 RP9Q8TA86 221 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 GDPD5Q8WTR4 605 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 GPR22Q99680 433 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 TRIM62Q9BVG3 475 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 DRC3Q9H069 523 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 RHOJQ9H4E5 214 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 Q9H521 79 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 E9PBE3 544 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 GABRDO14764 452 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 KLHL41O60662 606 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 F2P00734 622 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 ARRB2P32121 409 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 CLCN2P51788 898 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 USP4Q13107 963 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 HERC3Q15034 1050 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 VWA5B1Q5TIE3 1220 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 CCDC124Q96CT7 223 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 ATXN7L3BQ96GX2 97 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 MAML3Q96JK9 1138 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 AGAP2Q99490 1192 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 TASP1Q9H6P5 420 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 WDR6Q9NNW5 1121 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 TMPRSS4Q9NRS4 437 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 IARS2Q9NSE4 1012 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 ZNF358Q9NW07 568 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 VPS28Q9UK41 221 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 GJD2Q9UKL4 321 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 AAR2Q9Y312 384 aaKnown RBP12.97□□□□□ -0.33
TCF4-289ENST00000637941 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
TCF4-289ENST00000637941 LOC100653049A0A140TA62 436 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 MATN2O00339 956 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 CLDN5O00501 218 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 ATP9BO43861 1147 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 KRT34O76011 436 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 DDHD2O94830 711 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 LTFP02788 710 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.33
TCF4-289ENST00000637941 RAG1P15918 1043 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 NFKB1P19838 968 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 CYP2C18P33260 490 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 NDUFV1P49821 464 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 FKBP1BP68106 108 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 SATB1Q01826 763 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 IRF5Q13568 498 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 RBBP5Q15291 538 aaKnown RBP12.96□□□□□ -0.33
TCF4-289ENST00000637941 TRIP10Q15642 601 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 SLC9B1Q4ZJI4 515 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 PAQR9Q6ZVX9 377 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms