RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 ARHGAP17Q68EM7 881 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 SH3RF2Q8TEC5 729 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 TRIM51Q9BSJ1 452 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 HEMGNQ9BXL5 484 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 CCM2LQ9NUG4 571 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 CLDND1Q9NY35 253 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
CACNA1A-244ENST00000637625 GATMP50440 423 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 BCAT1P54687 386 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 CCL23P55773 120 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 BST2Q10589 180 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 CDO1Q16878 200 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 TRNP1Q6NT89 227 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 ANKS1BQ7Z6G8 1248 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 PTRH1Q86Y79 214 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 CASKIN2Q8WXE0 1202 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 FAM118BQ9BPY3 351 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 ZMAT4Q9H898 229 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 FAM50BQ9Y247 325 aa13.17□□□□□ -0.3
CACNA1A-244ENST00000637625 FAM170BA6NMN3 283 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PHF2O75151 1096 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 COL6A2P12110 1019 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 FPR2P25090 351 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 TUSC3Q13454 348 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 BFSP2Q13515 415 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PIGHQ14442 188 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 GPNMBQ14956 572 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 C15orf59Q2T9L4 293 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ESRP1Q6NXG1 681 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SLC24A5Q71RS6 500 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ZAR1Q86SH2 424 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PRELID2Q8N945 189 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SLC35F5Q8WV83 523 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 LRCH4O75427 683 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 BEST1O76090 585 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 DDHD2O94830 711 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 IL33O95760 270 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 RALAP11233 206 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ODC1P11926 461 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 BCAR1P56945 870 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PCBP3P57721 371 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SNX1Q13596 522 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ZNF267Q14586 743 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SIX1Q15475 284 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 GLE1Q53GS7 698 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 CPZQ66K79 652 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 KAZNQ674X7 775 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ARFGAP1Q8N6T3 406 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 ANKRD52Q8NB46 1076 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 C1orf54Q8WWF1 131 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 DPH5Q9H2P9 285 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 UBN1Q9NPG3 1134 aa13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 PRG3Q9Y2Y8 225 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-244ENST00000637625 SLC12A8A0AV02 714 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 A6NNZ2 444 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 KRT10P13645 584 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 GPD1P21695 349 aa13.15□□□□□ -0.3
CACNA1A-244ENST00000637625 MCM3P25205 808 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms