RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
PNKP-228ENST00000637325 LRRC72A6NJI9 287 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 ATP9BO43861 1147 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 SNAP91O60641 907 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 GOT1P17174 413 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 FANCCQ00597 558 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 NR1I3Q14994 352 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 PSAPL1Q6NUJ1 521 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 SCYL2Q6P3W7 929 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 ZNF783Q6ZMS7 281 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 MCOLN2Q8IZK6 566 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 SH2D3CQ8N5H7 860 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 FRS2Q8WU20 508 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 CENPIQ92674 756 aaPredicted RBP14.15□□□□□ -0.14
PNKP-228ENST00000637325 BIRC7Q96CA5 298 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 CCDC114Q96M63 670 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 MCEEQ96PE7 176 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 PSMB7Q99436 277 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 ZDHHC5Q9C0B5 715 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 OSBPL2Q9H1P3 480 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 SLC32A1Q9H598 525 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 VPS51Q9UID3 782 aa14.15□□□□□ -0.14
PNKP-228ENST00000637325 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.15□□□□□ -0.14
PNKP-228ENST00000637325 A0A0D9SEW6 157 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 ILVBLA1L0T0 632 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 C1QTNF3-AMACRE9PGA6 284 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 CBX4O00257 560 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 PLEKP08567 350 aaPredicted RBP14.14□□□□□ -0.15
PNKP-228ENST00000637325 ADRB1P08588 477 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 RRM1P23921 792 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 ZNF143P52747 638 aaPredicted RBP14.14□□□□□ -0.15
PNKP-228ENST00000637325 GALCP54803 685 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 HDAC4P56524 1084 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 UBASH3AP57075 661 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 KLHL30Q0D2K2 578 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 GRIK2Q13002 908 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 TEAD4Q15561 434 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 SKOR2Q2VWA4 1001 aaPredicted RBP14.14□□□□□ -0.15
PNKP-228ENST00000637325 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 NCEH1Q6PIU2 408 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.14□□□□□ -0.15
PNKP-228ENST00000637325 Q6ZVU0 165 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 SLFN11Q7Z7L1 901 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 CCDC185Q8N715 623 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 DCAF4L2Q8NA75 395 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 OR7D4Q8NG98 312 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 OR2I1PQ8NGU4 316 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 OR14C36Q8NHC7 312 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 VCPIP1Q96JH7 1222 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 EDEM3Q9BZQ6 932 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 ATP13A1Q9HD20 1204 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 TAS2R14Q9NYV8 317 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 AIPL1Q9NZN9 384 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 SERGEFQ9UGK8 458 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 HS3ST2Q9Y278 367 aa14.14□□□□□ -0.15
PNKP-228ENST00000637325 TDRD6O60522 2096 aaKnown RBP14.14□□□□□ -0.15
PNKP-228ENST00000637325 MCF2LO15068 1137 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 ALOX15BO15296 676 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 CCP110O43303 1012 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 MT-CO1P00395 513 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 SRCP12931 536 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 RHOQP17081 205 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 CSRP1P21291 193 aaKnown RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 CD27P26842 260 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 ETFBP38117 255 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 RECQLP46063 649 aaPredicted RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 CLCN6P51797 869 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 AFF3P51826 1226 aaKnown RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 RPL7AP62424 266 aaKnown RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 NRG1Q02297 640 aaPredicted RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 GNA12Q03113 381 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 EFHC2Q5JST6 749 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 N4BP2L1Q5TBK1 243 aaPredicted RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 IL27RAQ6UWB1 636 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 LINGO4Q6UY18 593 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 ADAT2Q7Z6V5 191 aaKnown RBP14.13□□□□□ -0.15
PNKP-228ENST00000637325 AADATQ8N5Z0 425 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 DEFB124Q8NES8 71 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 OR2T34Q8NGX1 318 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 NTAN1Q96AB6 310 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 CNPY3Q9BT09 278 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 RETREG1Q9H6L5 497 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 PARVAQ9NVD7 372 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 ADAMTS1Q9UHI8 967 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 DNAI1Q9UI46 699 aa14.13□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3DA0A087WVF3 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3IA0A087WXS9 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3EA0A087X179 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3KA0A087X1G2 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 A0A1B0GVT2 93 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TCRBV5S1A1TA0A578 114 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3FA6NER0 549 aaPredicted RBP14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3LB9A6J9 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 K7ERQ8 282 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms