RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SNX13	Q9Y5W8	968 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CDY2A	Q9Y6F7	541 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CDY1	Q9Y6F8	540 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033		C9IYK1	514 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MDM4	O15151	490 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SPTLC1	O15269	473 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RNASEH2A	O75792	299 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	JCHAIN	P01591	159 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GARS	P41250	739 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GJA9	P57773	515 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MPP3	Q13368	585 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SNAPC2	Q13487	334 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MAP7	Q14244	749 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DGKD	Q16760	1214 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SEL1L3	Q68CR1	1132 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PIGZ	Q86VD9	579 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KCNMB4	Q86W47	210 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CPNE9	Q8IYJ1	553 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FAM81A	Q8TBF8	368 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	AFG1L	Q8WV93	481 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EXT2	Q93063	718 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	VPS39	Q96JC1	886 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FAM167A	Q96KS9	214 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SIK2	Q9H0K1	926 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TRPV6	Q9H1D0	765 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DNAJC28	Q9NX36	388 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TLK1	Q9UKI8	766 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PCDHB12	Q9Y5F1	795 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EEF2K	O00418	725 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CCL22	O00626	93 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MT-CYB	P00156	380 aa	Predicted RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CKMT2	P17540	419 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	HNRNPD	Q14103	355 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PPP1R3A	Q16821	1122 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FBXO48	Q5FWF7	155 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LBX2	Q6XYB7	198 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TMEM110	Q86TL2	294 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	NT5DC4	Q86YG4	428 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ARHGAP18	Q8N392	663 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	OR9I1	Q8NGQ6	314 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LRTOMT	Q8WZ04	291 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PHF21B	Q96EK2	531 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CYP3A43	Q9HB55	503 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CHST12	Q9NRB3	414 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PSMD13	Q9UNM6	376 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TDRKH	Q9Y2W6	561 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MTF2	Q9Y483	593 aa	Predicted RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	COMMD3-BMI1	R4GMX3	469 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	C19orf81	C9J6K1	198 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	C22orf31	O95567	290 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	UGT1A6	P19224	532 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SPR	P35270	261 aa	Predicted RBP	13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	NOMO2	Q5JPE7	1267 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RARS2	Q5T160	578 aa	Known RBP	13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	OSMR	Q99650	979 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RBBP8	Q99708	897 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CIB1	Q99828	191 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FERMT1	Q9BQL6	677 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RNF39	Q9H2S5	420 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PIGV	Q9NUD9	493 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	BFAR	Q9NZS9	450 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LMCD1	Q9NZU5	365 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SFMBT1	Q9UHJ3	866 aa		13.27	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PTPRF	P10586	1907 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	IGKV6-21	A0A0C4DH24	114 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	FAM149A	A5PLN7	773 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	NFKBIE	O00221	500 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	ERCC2	P18074	760 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	NFKB1	P19838	968 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	MAP3K7CL	P57077	242 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	SH2D4B	Q5SQS7	431 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	TIFAB	Q6ZNK6	161 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	APLF	Q8IW19	511 aa	Predicted RBP	13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	CHST13	Q8NET6	341 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	NXNL1	Q96CM4	212 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	DCUN1D5	Q9BTE7	237 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	MED10	Q9BTT4	135 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	XPR1	Q9UBH6	696 aa		13.27	□□□□□ -0.29
CHRNA7-223	ENST00000637033	TMX2-CTNND1	H3BSU7	103 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033		I6L893	689 aa	Predicted RBP	13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	SOCS7	O14512	581 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	AURKA	O14965	403 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	ALDH1A2	O94788	518 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	VAPB	O95292	243 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	CLIC3	O95833	236 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	HARS2	P49590	506 aa	Known RBP	13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	ZBTB17	Q13105	803 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	MTX3	Q5HYI7	312 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	NPW	Q8N729	165 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	TRIML2	Q8N7C3	387 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	ERLEC1	Q96DZ1	483 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	SMARCAD1	Q9H4L7	1026 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	SPON1	Q9HCB6	807 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	SETD4	Q9NVD3	440 aa		13.26	□□□□□ -0.29
CHRNA7-223	ENST00000637033	MORF4L1	Q9UBU8	362 aa		13.26	□□□□□ -0.29

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