RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TTC30AQ86WT1 665 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 LRRC71Q8N4P6 559 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 RNF148Q8N7C7 305 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 SLC35F5Q8WV83 523 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 ZNF669Q96BR6 464 aaPredicted RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 RMND5BQ96G75 393 aaPredicted RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 LGMNQ99538 433 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 EFHD1Q9BUP0 239 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 PIH1D1Q9NWS0 290 aaKnown RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 BFARQ9NZS9 450 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 SLC8A2Q9UPR5 921 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 SH3PXD2BA1X283 911 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 ZNF701M0R085 212 aaPredicted RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 BMP10O95393 424 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 LTFP02788 710 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 MCF2P10911 925 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 DNAJB1P25685 340 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 GMPRP36959 345 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 ESRRGP62508 458 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 RHDQ02161 417 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TRAP1Q12931 704 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 PDAP1Q13442 181 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 KYAT1Q16773 422 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 ARL13AQ5H913 290 aaPredicted RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 IL23RQ5VWK5 629 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 CES3Q6UWW8 571 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 SLC26A9Q7LBE3 791 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TRIM50Q86XT4 487 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TEPSINQ96N21 525 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 FCRL3Q96P31 734 aaPredicted RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 COQ10BQ9H8M1 238 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 FAIMQ9NVQ4 179 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TUBA8Q9NY65 449 aaPredicted RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 TLK1Q9UKI8 766 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 SH3GLB1Q9Y371 365 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 USP3Q9Y6I4 520 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 C7orf72A4D263 438 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TCAF2A6NFQ2 919 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 AMHP03971 560 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 CD1EP15812 388 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 IRF9Q00978 393 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 MPP3Q13368 585 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 MAPRE2Q15555 327 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 NRF1Q16656 503 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 SH3D19Q5HYK7 790 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 PSTKQ8IV42 348 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 TMA16Q96EY4 203 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 DUS3LQ96G46 650 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 ATXN7L3BQ96GX2 97 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 C12orf42Q96LP6 360 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 TMEM79Q9BSE2 394 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 OSBPL6Q9BZF3 934 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 CLK4Q9HAZ1 481 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 ADA2Q9NZK5 511 aa15.07■□□□□ 0
CACNA1A-220ENST00000635988 IPO11Q9UI26 975 aaKnown RBP15.07■□□□□ 0
CACNA1A-220ENST00000635988 MAGEB16A2A368 324 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 TRPC5OSA6NMA1 111 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 DDHD2O94830 711 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 TGFB3P10600 412 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 NSUN2Q08J23 767 aaKnown RBP eCLIP15.06■□□□□ 0
CACNA1A-220ENST00000635988 STX5Q13190 355 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 PPP1R26Q5T8A7 1209 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 METTL7BQ6UX53 244 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 C12orf29Q8N999 325 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 SMYD1Q8NB12 490 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 ATP6V1E2Q96A05 226 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 DNAI2Q9GZS0 605 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 TASP1Q9H6P5 420 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 CAAP1Q9H8G2 361 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 PRMT7Q9NVM4 692 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 NSMCE4AQ9NXX6 385 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 STX16-NPEPL1H3BU86 382 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 GOT1P17174 413 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 TFE3P19532 575 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 PSME3P61289 254 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 MBTD1Q05BQ5 628 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 ANO4Q32M45 955 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 IRAK1BP1Q5VVH5 260 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 DUS1LQ6P1R4 473 aaKnown RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 STRADAQ7RTN6 431 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 PPP1R36Q96LQ0 422 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 ANKRD60Q9BZ19 345 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 C20orf96Q9NUD7 363 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 VANGL2Q9ULK5 521 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
CACNA1A-220ENST00000635988 COPG1Q9Y678 874 aaKnown RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 COL11A1P12107 1806 aaPredicted RBP15.06■□□□□ 0
CACNA1A-220ENST00000635988 FER1L6Q2WGJ9 1857 aa15.05■□□□□ 0
CACNA1A-220ENST00000635988 PHIPQ8WWQ0 1821 aa15.05■□□□□ 0
CACNA1A-220ENST00000635988 C9IYK1 514 aa15.05■□□□□ 0
CACNA1A-220ENST00000635988 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ 0
CACNA1A-220ENST00000635988 PTPN1P18031 435 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 370.1 ms