RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ZNF212Q9UDV6 495 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 TLR6Q9Y2C9 796 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 AP3M1Q9Y2T2 418 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PLIN3O60664 434 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SOAT2O75908 522 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 OAS1P00973 400 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 EPOP01588 193 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 DHRS4L1P0CG22 281 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NFKB1P19838 968 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 TUBP50607 506 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ATP6V0D1P61421 351 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PSMD5Q16401 504 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SPOUT1Q5T280 376 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 LRRC8EQ6NSJ5 796 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZFP1Q6P2D0 407 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CEP70Q8NHQ1 597 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZMAT2Q96NC0 199 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 AGAP3Q96P47 875 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 OLFM3Q96PB7 478 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ADGRE3Q9BY15 652 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ABCF3Q9NUQ8 709 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PRKAG3Q9UGI9 489 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 DPP7Q9UHL4 492 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 LIN7AO14910 233 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLC7A4O43246 635 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 USP17L7P0C7H9 530 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SELPP16109 830 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PTPN3P26045 913 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ALDH7A1P49419 539 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SATB1Q01826 763 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLC14A2Q15849 920 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 C1orf146Q5VVC0 180 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF567Q8N184 647 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 IPMKQ8NFU5 416 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RP9Q8TA86 221 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 MRPL57Q9BQC6 102 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 PRM3Q9NNZ6 103 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RIC8BQ9NVN3 520 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 RIMKLBQ9ULI2 386 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 A0A1W2PPM1 405 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CYBBP04839 570 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 TPBGLP0DKB5 382 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 GJA5P36382 358 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 FLT3LGP49771 235 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NKX3-2P78367 333 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ADAM17P78536 824 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 IL10RBQ08334 325 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CDC16Q13042 620 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF177Q13360 481 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 C10orf120Q5SQS8 335 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 NXNQ6DKJ4 435 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 LIMS2Q7Z4I7 341 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SMG8Q8ND04 991 aaKnown RBP4.64□□□□□ -1.67
SCN1A-210ENST00000635776 LRGUKQ96M69 825 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 LGMNQ99538 433 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 SLC39A10Q9ULF5 831 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF510Q9Y2H8 683 aa4.64□□□□□ -1.67
SCN1A-210ENST00000635776 CASTOR2A6NHX0 329 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KIF3CO14782 793 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HDAC3O15379 428 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CYBAP13498 195 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 BDNFP23560 247 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ATP5C1P36542 298 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RGS4P49798 205 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RPL14P50914 215 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 E2F5Q15329 346 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 NEPROQ6NW34 567 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PRMT9Q6P2P2 845 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC185Q8N715 623 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FAM161BQ96MY7 647 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DPEP3Q9H4B8 488 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 IARS2Q9NSE4 1012 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJC16Q9Y2G8 782 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TELO2Q9Y4R8 837 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DIAPH2O60879 1101 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TRIP4Q15650 581 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SLC1A5Q15758 541 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RAB41Q5JT25 222 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FAM26DQ5JW98 314 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PRPF39Q86UA1 669 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SCUBE1Q8IWY4 988 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 OR6P1Q8NGX9 317 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 C10orf82Q8WW14 230 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PABPC5Q96DU9 382 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FICDQ9BVA6 458 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MAGEH1Q9H213 219 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CASS4Q9NQ75 786 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TCF7L2Q9NQB0 619 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HSFX1Q9UBD0 423 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PRPF19Q9UMS4 504 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CDK5RAP2Q96SN8 1893 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 WASH4PA8MWX3 477 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CLDN11O75508 207 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GLP2RO95838 553 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TCF4P15884 667 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CD52P31358 61 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ALDH1A3P47895 512 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KPNB1Q14974 876 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms