RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CALN1Q9BXU9 219 aa20.71■□□□□ 0.91
TARDBP-228ENST00000629725 ST7Q9NRC1 585 aa20.71■□□□□ 0.91
TARDBP-228ENST00000629725 SLC25A13Q9UJS0 675 aa20.71■□□□□ 0.91
TARDBP-228ENST00000629725 NEMP2A6NFY4 417 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 ATP9BO43861 1147 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 MYF5P13349 255 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 PRLRP16471 622 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 DUSP3P51452 185 aaPredicted RBP20.7■□□□□ 0.9
TARDBP-228ENST00000629725 OXCT1P55809 520 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 DLG2Q15700 870 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 TTC39BQ5VTQ0 682 aaPredicted RBP20.7■□□□□ 0.9
TARDBP-228ENST00000629725 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 KLK6Q92876 244 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 MED8Q96G25 268 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 PPP1R9BQ96SB3 815 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 DUSP23Q9BVJ7 150 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 USP29Q9HBJ7 922 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 EVA1BQ9NVM1 165 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 SLC12A6Q9UHW9 1150 aa20.7■□□□□ 0.9
TARDBP-228ENST00000629725 A0A1W2PQU0 124 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 TCAF2A6NFQ2 919 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 KCNU1A8MYU2 1149 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 CALCAP01258 141 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 AKT2P31751 481 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 PKP1Q13835 747 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 PIP5KL1Q5T9C9 394 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 CXorf57Q6NSI4 855 aaKnown RBP20.69■□□□□ 0.9
TARDBP-228ENST00000629725 NEK5Q6P3R8 708 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 Q6ZVU0 165 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 ATP6V0D2Q8N8Y2 350 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 OR13H1Q8NG92 308 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 MAPK15Q8TD08 544 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 FZD3Q9NPG1 666 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 SATB2Q9UPW6 733 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 SSUH2Q9Y2M2 353 aa20.69■□□□□ 0.9
TARDBP-228ENST00000629725 SPTA1P02549 2419 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 LY6G6EA0A0G2JKS1 128 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 SCAMP1O15126 338 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 ARHGAP6O43182 974 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 SLC28A2O43868 658 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 BNIP3LO60238 219 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 TRUB2O95900 331 aaKnown RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 HNRNPA2B1P22626 353 aaKnown RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 RBMS1P29558 406 aaKnown RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 RPL34P49207 117 aaKnown RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 CCDC15Q0P6D6 951 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 ISXQ2M1V0 245 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 C3orf38Q5JPI3 329 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 RABGAP1LQ5R372 815 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 IGF2-ASQ6U949 168 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 KRBA2Q6ZNG9 492 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 PPM1KQ8N3J5 372 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 IFI44Q8TCB0 444 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 RNF34Q969K3 372 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 SLC35C1Q96A29 364 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 CCDC97Q96F63 343 aaPredicted RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 IFT43Q96FT9 208 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 SPATA32Q96LK8 384 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 NT5C1BQ96P26 610 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 PRMT1Q99873 361 aaKnown RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 CAAP1Q9H8G2 361 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 POPDC2Q9HBU9 364 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 ARMCX3Q9UH62 379 aaPredicted RBP20.68■□□□□ 0.9
TARDBP-228ENST00000629725 U3KQA8 63 aa20.68■□□□□ 0.9
TARDBP-228ENST00000629725 FAM237AA0A1B0GTK4 181 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 K7ENP7 123 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 K7ESM1 405 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 WISP1O95388 367 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
TARDBP-228ENST00000629725 GPD2P43304 727 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 ACADSBP45954 432 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 FKBP3Q00688 224 aaKnown RBP20.67■□□□□ 0.9
TARDBP-228ENST00000629725 ZNF284Q2VY69 593 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 INO80CQ6PI98 192 aaPredicted RBP20.67■□□□□ 0.9
TARDBP-228ENST00000629725 HORMAD1Q86X24 394 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 SLC22A18ASQ8N1D0 253 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 SH2D3CQ8N5H7 860 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 ALG14Q96F25 216 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 SLC46A1Q96NT5 459 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 TSG101Q99816 390 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 FEM1AQ9BSK4 669 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 DNAJC28Q9NX36 388 aa20.67■□□□□ 0.9
TARDBP-228ENST00000629725 FARP1Q9Y4F1 1045 aaPredicted RBP20.67■□□□□ 0.9
TARDBP-228ENST00000629725 COL27A1Q8IZC6 1860 aaPredicted RBP20.67■□□□□ 0.9
TARDBP-228ENST00000629725 BSNQ9UPA5 3926 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 LZTS3O60299 673 aaPredicted RBP20.66■□□□□ 0.9
TARDBP-228ENST00000629725 NEBLO76041 1014 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 TGM2P21980 687 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 FMO5P49326 533 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 CLDN2P57739 230 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 HNRNPKP61978 463 aaKnown RBP eCLIP20.66■□□□□ 0.9
TARDBP-228ENST00000629725 ZNF542PQ5EBM4 170 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 KIAA1614Q5VZ46 1190 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 KAT5Q92993 513 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 GRAMD1AQ96CP6 724 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 RPRD1AQ96P16 312 aaPredicted RBP20.66■□□□□ 0.9
TARDBP-228ENST00000629725 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms