RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 RNF220Q5VTB9 566 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 C1orf146Q5VVC0 180 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 RSPO2Q6UXX9 243 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 ST13P4Q8IZP2 240 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 GSDMBQ8TAX9 411 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 THTPAQ9BU02 230 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 C10orf88Q9H8K7 445 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 CXXC1Q9P0U4 656 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 ARMCX1Q9P291 453 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 PRKAG2Q9UGJ0 569 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SDR42E2A6NKP2 422 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 FAM159BA6NKW6 160 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SYN3O14994 580 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 CD48P09326 243 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 TPSB2P20231 275 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 CDH6P55285 790 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SLC6A3Q01959 620 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 FPGSQ05932 587 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 TPSAB1Q15661 275 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SH3PXD2AQ5TCZ1 1133 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 PRSS55Q6UWB4 352 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 TREML1Q86YW5 311 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 CDKL3Q8IVW4 592 aaPredicted RBP18.01■□□□□ 0.47
PCF11-207ENST00000624931 STKLD1Q8NE28 680 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 RXFP2Q8WXD0 754 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SMARCD1Q96GM5 515 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 RILPQ96NA2 401 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 PANX3Q96QZ0 392 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 TBCBQ99426 244 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 ZCWPW1Q9H0M4 648 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 PCSK1NQ9UHG2 260 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 SLC7A8Q9UHI5 535 aa18.01■□□□□ 0.47
PCF11-207ENST00000624931 HHLA1C9JL84 531 aa18■□□□□ 0.47
PCF11-207ENST00000624931 APOL1O14791 398 aa18■□□□□ 0.47
PCF11-207ENST00000624931 PRPSAP2O60256 369 aa18■□□□□ 0.47
PCF11-207ENST00000624931 CCNT2O60583 730 aaKnown RBP18■□□□□ 0.47
PCF11-207ENST00000624931 ARPP19P56211 112 aa18■□□□□ 0.47
PCF11-207ENST00000624931 MRPS5P82675 430 aaKnown RBP18■□□□□ 0.47
PCF11-207ENST00000624931 BTG3Q14201 252 aaPredicted RBP18■□□□□ 0.47
PCF11-207ENST00000624931 C15orf59Q2T9L4 293 aaPredicted RBP18■□□□□ 0.47
PCF11-207ENST00000624931 IZUMO2Q6UXV1 221 aa18■□□□□ 0.47
PCF11-207ENST00000624931 CDHR3Q6ZTQ4 885 aa18■□□□□ 0.47
PCF11-207ENST00000624931 ACAD11Q709F0 780 aa18■□□□□ 0.47
PCF11-207ENST00000624931 NCSTNQ92542 709 aa18■□□□□ 0.47
PCF11-207ENST00000624931 HSFY1Q96LI6 401 aa18■□□□□ 0.47
PCF11-207ENST00000624931 PGLYRP2Q96PD5 576 aa18■□□□□ 0.47
PCF11-207ENST00000624931 XAB2Q9HCS7 855 aaKnown RBP18■□□□□ 0.47
PCF11-207ENST00000624931 S100A14Q9HCY8 104 aa18■□□□□ 0.47
PCF11-207ENST00000624931 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
PCF11-207ENST00000624931 ABI2Q9NYB9 513 aaPredicted RBP18■□□□□ 0.47
PCF11-207ENST00000624931 WASF2Q9Y6W5 498 aa18■□□□□ 0.47
PCF11-207ENST00000624931 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
PCF11-207ENST00000624931 PATJQ8NI35 1801 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 C2CD4BA6NLJ0 364 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 BAIAP3O94812 1187 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 ZBED1O96006 694 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 ZFXP17010 805 aaPredicted RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 CYP2F1P24903 491 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 ALDH7A1P49419 539 aaKnown RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 TKTL1P51854 596 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 ASPHQ12797 758 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCF11-207ENST00000624931 MRPL58Q14197 206 aaKnown RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 KRT81Q14533 505 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 HSF5Q4G112 596 aaPredicted RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 EFHC1Q5JVL4 640 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 KCNT2Q6UVM3 1135 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 SPATA2LQ8IUW3 424 aaPredicted RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 CCNJLQ8IV13 435 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 TTC9BQ8N6N2 239 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 PPP1R14CQ8TAE6 165 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 ATP2A3Q93084 1043 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 EBNA1BP2Q99848 306 aaKnown RBP17.99■□□□□ 0.47
PCF11-207ENST00000624931 ULBP1Q9BZM6 244 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 LRRC4Q9HBW1 653 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 PCDHA11Q9Y5I1 949 aa17.99■□□□□ 0.47
PCF11-207ENST00000624931 DPYSL4O14531 572 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 KCNN4O15554 427 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 FGBP02675 491 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 TFE3P19532 575 aaPredicted RBP17.98■□□□□ 0.47
PCF11-207ENST00000624931 GRK2P25098 689 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 PRDX6P30041 224 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 MAGEA3P43357 314 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 ACADSBP45954 432 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 GPR15P49685 360 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 CUL3Q13618 768 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 CDO1Q16878 200 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 SDHAF4Q5VUM1 108 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 ZNF280DQ6N043 979 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 SDCCAG8Q86SQ7 713 aaPredicted RBP17.98■□□□□ 0.47
PCF11-207ENST00000624931 KBTBD2Q8IY47 623 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 NDUFAF2Q8N183 169 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 FAM172AQ8WUF8 416 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 AZIN2Q96A70 460 aa17.98■□□□□ 0.47
PCF11-207ENST00000624931 IGSF21Q96ID5 467 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms