RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 RBP1P09455 135 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ARFIP1P53367 373 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NIPAL1Q6NVV3 410 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NT5DC3Q86UY8 548 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SLC22A9Q8IVM8 553 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 UHMK1Q8TAS1 419 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HASPINQ8TF76 798 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DNAJC5BQ9UF47 199 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MED14O60244 1454 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NFIBO00712 420 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DCLK1O15075 740 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SERPINA3P01011 423 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 JUNDP17535 347 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CDH15P55291 814 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DSG2Q14126 1118 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 IRGCQ6NXR0 463 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 IRF7Q92985 503 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ARL5BQ96KC2 179 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ROGDIQ9GZN7 287 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PRDM8Q9NQV8 689 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 AP3M1Q9Y2T2 418 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 A0A0G2JND7 137 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 EPHX1P07099 455 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DGKAP23743 735 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GJC2Q5T442 439 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 OR2W6PQ8NHA6 318 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DSN1Q9H410 356 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CHMP1AQ9HD42 196 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 EXD2Q9NVH0 621 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 DNAAF2Q9NVR5 837 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NCKIPSDQ9NZQ3 722 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PCDHGA6Q9Y5G7 932 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HECW2Q9P2P5 1572 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 A0A1B0GTH6 734 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ATP9AO75110 1047 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ARMC5Q96C12 935 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MTA3Q9BTC8 594 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GLSO94925 669 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 IL13P35225 146 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GALK2Q01415 458 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ZDHHC17Q8IUH5 632 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 IPCEF1Q8WWN9 437 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SNX21Q969T3 373 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NAT9Q9BTE0 207 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CNTNAP4Q9C0A0 1308 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TRAPPC6AO75865 159 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MMP1P03956 469 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 LBPP18428 481 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CMPK1P30085 196 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SMIM11AP58511 58 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MRPS6P82932 125 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PSTKQ8IV42 348 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ADCY4Q8NFM4 1077 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NXPE3Q969Y0 559 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PTPN2P17706 415 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PTPRAP18433 802 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CTBP2P56545 445 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PKN1Q16512 942 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SNRNP35Q16560 246 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 FAM153CQ494X1 144 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF518BQ9C0D4 1074 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PLCL2Q9UPR0 1127 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 FAM196BA6NMK8 535 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TOP3BO95985 862 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ZBTB48P10074 688 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 KITP10721 976 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 KLRC1P26715 233 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ADORA1P30542 326 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MLLT3P42568 568 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CBWD6Q4V339 395 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 DDX28Q9NUL7 540 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 IL6P05231 212 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ALADP13716 330 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 NQO1P15559 274 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 BMP7P18075 431 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 GHRHRQ02643 423 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ST3GAL4Q11206 333 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CSHL1Q14406 222 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PDK2Q15119 407 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PAPD7Q5XG87 772 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ARL9Q6T311 187 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RUSC1Q9BVN2 902 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PCDH18Q9HCL0 1135 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SPATA7Q9P0W8 599 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 XPO7Q9UIA9 1087 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PER2O15055 1255 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 IFNGP01579 166 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 GAD2Q05329 585 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PDIA2Q13087 525 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CUL2Q13617 745 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms