RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 LRRC34Q8IZ02 419 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 GBP7Q8N8V2 638 aaPredicted RBP16.68■□□□□ 0.26
LDB3-208ENST00000623007 BCL7CQ8WUZ0 217 aaPredicted RBP16.68■□□□□ 0.26
LDB3-208ENST00000623007 MRRFQ96E11 262 aaKnown RBP16.68■□□□□ 0.26
LDB3-208ENST00000623007 CERS2Q96G23 380 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 PRKD2Q9BZL6 878 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 SP110Q9HB58 689 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 ZFATQ9P243 1243 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 SOX13Q9UN79 622 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 ASB3Q9Y575 518 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 RPS6KL1Q9Y6S9 549 aa16.68■□□□□ 0.26
LDB3-208ENST00000623007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.67■□□□□ 0.26
LDB3-208ENST00000623007 A0A1W2PPM1 405 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 COPEO14579 308 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 RAMP2O60895 175 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 RAG1P15918 1043 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 PAMP19021 973 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 RPA3P35244 121 aaPredicted RBP16.67■□□□□ 0.26
LDB3-208ENST00000623007 ETFBP38117 255 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 CCNFP41002 786 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 PGFP49763 221 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
LDB3-208ENST00000623007 MPP2Q14168 576 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 LRRC14Q15048 493 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 MARC1Q5VT66 337 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 SRLQ86TD4 932 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 MIB1Q86YT6 1006 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 RAB3IL1Q8TBN0 382 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 RPRD1AQ96P16 312 aaPredicted RBP16.67■□□□□ 0.26
LDB3-208ENST00000623007 SLC25A51Q9H1U9 297 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
LDB3-208ENST00000623007 RBM22Q9NW64 420 aaKnown RBP eCLIP16.67■□□□□ 0.26
LDB3-208ENST00000623007 SYBUQ9NX95 663 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 STARD13Q9Y3M8 1113 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 PCDHB12Q9Y5F1 795 aa16.67■□□□□ 0.26
LDB3-208ENST00000623007 TRIM49D1C9J1S8 452 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 SNX3O60493 162 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 SPAG7O75391 227 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 GP5P40197 560 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 GRIA1P42261 906 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 EPHB3P54753 998 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 MTM1Q13496 603 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 SLC14A2Q15849 920 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 PCID2Q5JVF3 399 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 FBXL22Q6P050 247 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 LVRNQ6Q4G3 990 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 C6orf89Q6UWU4 347 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 CCDC121Q6ZUS5 278 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 PRPF39Q86UA1 669 aaKnown RBP16.66■□□□□ 0.26
LDB3-208ENST00000623007 TP53INP2Q8IXH6 220 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 TCEAL8Q8IYN2 117 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 MPP5Q8N3R9 675 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 OTUD6BQ8N6M0 293 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 OXNAD1Q96HP4 312 aaPredicted RBP16.66■□□□□ 0.26
LDB3-208ENST00000623007 TBL1YQ9BQ87 522 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 MLPHQ9BV36 600 aaPredicted RBP16.66■□□□□ 0.26
LDB3-208ENST00000623007 FSD1LQ9BXM9 530 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 CEP41Q9BYV8 373 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 PITPNM3Q9BZ71 974 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 MAGEH1Q9H213 219 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 CRISPLD1Q9H336 500 aa16.66■□□□□ 0.26
LDB3-208ENST00000623007 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
LDB3-208ENST00000623007 USP15Q9Y4E8 981 aaPredicted RBP16.66■□□□□ 0.26
LDB3-208ENST00000623007 ZNF840PA6NDX5 716 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ACSL4O60488 711 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 TACR2P21452 398 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 PBX3P40426 434 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 POLD2P49005 469 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 NEK3P51956 506 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 CSE1LP55060 971 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 WDR4P57081 412 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 WDR5P61964 334 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 POLD3Q15054 466 aaPredicted RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 UGP2Q16851 508 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 PDPK2PQ6A1A2 396 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 KYAT3Q6YP21 454 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 C14orf80Q86SX3 495 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 LCA5Q86VQ0 697 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 TEX26Q8N6G2 289 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 CNTD1Q8N815 330 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 GDAP1Q8TB36 358 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 TCP10LQ8TDR4 215 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 GIPC2Q8TF65 315 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 PAIP2Q9BPZ3 127 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 KIFC1Q9BW19 673 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ACTR5Q9H9F9 607 aaPredicted RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 CYP4F11Q9HBI6 524 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 PLAC1Q9HBJ0 212 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 HCSTQ9UBK5 93 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 DOCK4Q8N1I0 1966 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 IL1BP01584 269 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 PFKLP17858 780 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 TAC1P20366 129 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms