RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 EPB42P16452 691 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ME2P23368 584 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 EEF1B2P24534 225 aaKnown RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 PKLRP30613 574 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CD83Q01151 205 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CLCQ05315 142 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 FSTL1Q12841 308 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 FAM122CQ6P4D5 195 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CCDC60Q8IWA6 550 aaPredicted RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 AFAP1L2Q8N4X5 818 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 RAB2BQ8WUD1 216 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 TRIB2Q92519 343 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ZNF560Q96MR9 790 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 DHRS4Q9BTZ2 278 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CPNE5Q9HCH3 593 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PLLPQ9Y342 182 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 UGT2A1Q9Y4X1 527 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PCDHA2Q9Y5H9 948 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 SYNDIG1LA6NDD5 238 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 TRIM49D1C9J1S8 452 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CYB561D2O14569 222 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 GRIA3P42263 894 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 SLC9A3P48764 834 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 GRSF1Q12849 480 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS11-209ENST00000622309 ORC2Q13416 577 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 KIAA0408Q6ZU52 694 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 FKBP9P1Q75LS8 142 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 SNX31Q8N9S9 440 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 KYQ8NBH2 561 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 FBXO36Q8NEA4 188 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ZSCAN18Q8TBC5 510 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 ZNF384Q8TF68 577 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 USP13Q92995 863 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 GJA10Q969M2 543 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MKRN2Q9H000 416 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 UBE2TQ9NPD8 197 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 SCUBE2Q9NQ36 999 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MCM9Q9NXL9 1143 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 SIRPGQ9P1W8 387 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ZNF221Q9UK13 617 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 POLHQ9Y253 713 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 DGKBQ9Y6T7 804 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 A0A1W2PQ72 361 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 RAD51BO15315 384 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 PHGDHO43175 533 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 NCAM1P13591 858 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ETS1P14921 441 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 TCN1P20061 433 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 ADSSP30520 456 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 RRM2P31350 389 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 HIBADHP31937 336 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 PSMC2P35998 433 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 RACK1P63244 317 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 MTM1Q13496 603 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ALCAMQ13740 583 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 NFIXQ14938 502 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 AASDHQ4L235 1098 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 TEX44Q53QW1 395 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 FAM182AQ5T1J6 154 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CYP4A22Q5TCH4 519 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 LGSNQ5TDP6 509 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 KCT2Q8NC54 265 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 BPIFB6Q8NFQ5 453 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 TMEM246Q9BRR3 403 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 COPG2Q9UBF2 871 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 VANGL2Q9ULK5 521 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 KIAA1024Q9UPX6 916 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 COL1A1P02452 1464 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 TRIM64BA6NI03 449 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 NBNO60934 754 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 USP12O75317 370 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 RPS6KA4O75676 772 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 KRT37O76014 449 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CAPNS1P04632 268 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ENO3P13929 434 aaPredicted RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 DNAJB1P25685 340 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MLLT10P55197 1068 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MYL7Q01449 175 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CYP20A1Q6UW02 462 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CDHR3Q6ZTQ4 885 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 CCDC103Q8IW40 242 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 GLIS1Q8NBF1 620 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 SLC4A11Q8NBS3 891 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 LRTOMTQ8WZ04 291 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ATP6V1E2Q96A05 226 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 GLT1D1Q96MS3 346 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MTMR9Q96QG7 549 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 TUBA1CQ9BQE3 449 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 ACAT2Q9BWD1 397 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 GPR88Q9GZN0 384 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 MKNK2Q9HBH9 465 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS11-209ENST00000622309 WARS2Q9UGM6 360 aaKnown RBP8.05□□□□□ -1.12
VPS11-209ENST00000622309 NARFQ9UHQ1 456 aa8.05□□□□□ -1.12
VPS11-209ENST00000622309 A0A0B4J269 797 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 LRRIQ4A6NIV6 560 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms