RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ERVW-1Q9UQF0 538 aa11.19□□□□□ -0.62
POLR2J3-221ENST00000621093 MRPS17Q9Y2R5 130 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-221ENST00000621093 BDP1A6H8Y1 2624 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 J3KR12 359 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 K7ERQ8 282 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 CBX4O00257 560 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 CD160O95971 181 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 MT-CO1P00395 513 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 HLA-EP13747 358 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 DEKP35659 375 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 IL12RB1P42701 662 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 NDST2P52849 883 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 OXCT1P55809 520 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 YBEYP58557 167 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 COPS2P61201 443 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 SERINC3Q13530 473 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 DMC1Q14565 340 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 ZNF234Q14588 700 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 PPP2R5EQ16537 467 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 PREPLQ4J6C6 727 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 ZNF783Q6ZMS7 281 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 VSIG1Q86XK7 387 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 ALLCQ8N6M5 410 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 RPLP0P6Q8NHW5 317 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 EXOC4Q96A65 974 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 PBXIP1Q96AQ6 731 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 NELL2Q99435 816 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 FAM118BQ9BPY3 351 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 CACNA2D2Q9NY47 1150 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 DTLQ9NZJ0 730 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 THAP10Q9P2Z0 257 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 STARD13Q9Y3M8 1113 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 SIT1Q9Y3P8 196 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 JRKLQ9Y4A0 524 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 HEY1Q9Y5J3 304 aa11.18□□□□□ -0.62
POLR2J3-221ENST00000621093 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 ARHGAP42A6NI28 874 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 SGK1O00141 431 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 KDELR3O43731 214 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 ADAM23O75077 832 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 DLDP09622 509 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 HNRNPLP14866 589 aaKnown RBP eCLIP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 VAV1P15498 845 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 PRKCHP24723 683 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 PTPN7P35236 360 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 ECT2LQ008S8 904 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 GALNT2Q10471 571 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 TFDP2Q14188 446 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 LRRC32Q14392 662 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 EIF4HQ15056 248 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 PARP15Q460N3 678 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 BBS12Q6ZW61 710 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 ADAT2Q7Z6V5 191 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 LZTR1Q8N653 840 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 IL17RCQ8NAC3 791 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 TXNDC5Q8NBS9 432 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 CLDN23Q96B33 292 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 OSBPL6Q9BZF3 934 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 PDFQ9HBH1 243 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 DLGAP2Q9P1A6 1054 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 RAD54BQ9Y620 910 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 STON1Q9Y6Q2 735 aa11.17□□□□□ -0.62
POLR2J3-221ENST00000621093 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 ZNF185O15231 689 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 TIMM44O43615 452 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 CEP104O60308 925 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 MAFKO60675 156 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 PRAMEF11O60813 436 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 ASLP04424 464 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 ATP5BP06576 529 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SRCP12931 536 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 AOC1P19801 751 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 COL9A1P20849 921 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SERPINB6P35237 376 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 FBXO43Q4G163 708 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SEL1L2Q5TEA6 688 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SLC13A5Q86YT5 568 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SH2D3CQ8N5H7 860 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 COG1Q8WTW3 980 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 UCMAQ8WVF2 138 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 MS4A14Q96JA4 679 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 OSBPL9Q96SU4 736 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 C2orf49Q9BVC5 232 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 CARD9Q9H257 536 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SP110Q9HB58 689 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms