RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TFR2Q9UP52 801 aa18.71■□□□□ 0.59
LITAF-220ENST00000620789 REXO2Q9Y3B8 237 aaKnown RBP18.71■□□□□ 0.59
LITAF-220ENST00000620789 A0A0A6YYK5 440 aaPredicted RBP18.7■□□□□ 0.58
LITAF-220ENST00000620789 SIN3BO75182 1162 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 ZMPSTE24O75844 475 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 MT-CO1P00395 513 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 SRCP12931 536 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 ERCC2P18074 760 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 GJC1P36383 396 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 ARL4AP40617 200 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 P2RY2P41231 377 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 YBEYP58557 167 aaPredicted RBP18.7■□□□□ 0.58
LITAF-220ENST00000620789 DPYSQ14117 519 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 SIM2Q14190 667 aaPredicted RBP18.7■□□□□ 0.58
LITAF-220ENST00000620789 C9orf64Q5T6V5 341 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 RETSATQ6NUM9 610 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 KIAA1324Q6UXG2 1013 aaKnown RBP18.7■□□□□ 0.58
LITAF-220ENST00000620789 LINGO4Q6UY18 593 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 CEP68Q76N32 757 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 POLNQ7Z5Q5 900 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 METTL3Q86U44 580 aaKnown RBP18.7■□□□□ 0.58
LITAF-220ENST00000620789 ATP11CQ8NB49 1132 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 ACRBPQ8NEB7 543 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 PTPRN2Q92932 1015 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 SIPA1Q96FS4 1042 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 PCDH18Q9HCL0 1135 aa18.7■□□□□ 0.58
LITAF-220ENST00000620789 CXorf51AA0A1B0GTR3 108 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 ZNF217O75362 1048 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 LMNAP02545 664 aaKnown RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 KRT7P08729 469 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 C7P10643 843 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 NOP2P46087 812 aaKnown RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 CLCN6P51797 869 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 NDST2P52849 883 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 CDH6P55285 790 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 ARF5P84085 180 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 SLC20A2Q08357 652 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 BYSLQ13895 437 aaKnown RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 KRT81Q14533 505 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 DLG2Q15700 870 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 MAP7D1Q3KQU3 841 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 PARP15Q460N3 678 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 ACCSLQ4AC99 568 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 SUMF1Q8NBK3 374 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 FAM71BQ8TC56 605 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 RLN3Q8WXF3 142 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 PRCCQ92733 491 aaPredicted RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 SPACA7Q96KW9 195 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 CSPG4P5Q96PW8 444 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 RSPH9Q9H1X1 276 aaPredicted RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 HPCAL4Q9UM19 191 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 SMG5Q9UPR3 1016 aaKnown RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 INVSQ9Y283 1065 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 NYNRINQ9P2P1 1898 aaKnown RBP18.69■□□□□ 0.58
LITAF-220ENST00000620789 USP34Q70CQ2 3546 aa18.69■□□□□ 0.58
LITAF-220ENST00000620789 PLXND1Q9Y4D7 1925 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 RASA4BC9J798 803 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 DCLK1O15075 740 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 RASA4O43374 803 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 VAV1P15498 845 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 SLC1A1P43005 524 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 SERPINH1P50454 418 aaKnown RBP18.68■□□□□ 0.58
LITAF-220ENST00000620789 VAV2P52735 878 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 ATP13A4Q4VNC1 1196 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 C11orf74Q86VG3 221 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 ZNF354CQ86Y25 554 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 CACUL1Q86Y37 369 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 TSC1Q92574 1164 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 HMCESQ96FZ2 354 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 KLC2Q9H0B6 622 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 LRRC19Q9H756 370 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 RCOR3Q9P2K3 495 aaPredicted RBP18.68■□□□□ 0.58
LITAF-220ENST00000620789 RAB23Q9ULC3 237 aa18.68■□□□□ 0.58
LITAF-220ENST00000620789 ZFHX2Q9C0A1 2572 aaPredicted RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 PRR23AA6NEV1 266 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 BTNL10A8MVZ5 291 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 K7ERQ8 282 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 SMAD6O43541 496 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 KDELR3O43731 214 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 BUB1BO60566 1050 aaPredicted RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 CD48P09326 243 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 ACADMP11310 421 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 ARSEP51690 589 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 GEMIN4P57678 1058 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 RPS14P62263 151 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 SERINC3Q13530 473 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 ELAVL3Q14576 367 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 ZNF776Q68DI1 518 aaPredicted RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 Q6ZVU0 165 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 FAM160A2Q8N612 972 aaPredicted RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 KCTD6Q8NC69 237 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 ZC3H10Q96K80 434 aaKnown RBP18.67■□□□□ 0.58
LITAF-220ENST00000620789 CD93Q9NPY3 652 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 ITM2CQ9NQX7 267 aa18.67■□□□□ 0.58
LITAF-220ENST00000620789 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms