RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 NOMO1Q15155 1222 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CCDC81Q6ZN84 652 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PHACTR4Q8IZ21 702 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 SMARCD1Q96GM5 515 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ADARB2Q9NS39 739 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 DDX18Q9NVP1 670 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PACSIN3Q9UKS6 424 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 DSEQ9UL01 958 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 STX7O15400 261 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RASSF9O75901 435 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MYL4P12829 197 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ADGRD1Q6QNK2 874 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MRPS31Q92665 395 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RMND5AQ9H871 391 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PNPOQ9NVS9 261 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ITGA2BP08514 1039 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PWP1Q13610 501 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PPP1R26Q5T8A7 1209 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CLNKQ7Z7G1 428 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CYP4X1Q8N118 509 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 VPS37AQ8NEZ2 397 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MRPL45Q9BRJ2 306 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ATXN3LQ9H3M9 355 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PRDM16Q9HAZ2 1276 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PNMA8BQ9ULN7 279 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PCDHB12Q9Y5F1 795 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 C4AP0C0L4 1744 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 C4BP0C0L5 1744 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ADCYAP1R1P41586 468 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ANXA11P50995 505 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 SPIRE1Q08AE8 756 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CEP78Q5JTW2 689 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PRMT9Q6P2P2 845 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MYO1HQ8N1T3 1032 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 NETO2Q8NC67 525 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 TADA1Q96BN2 335 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ULBP1Q9BZM6 244 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CCDC167Q9P0B6 97 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RABGEF1Q9UJ41 708 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 ENDOD1O94919 500 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CD48P09326 243 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CCR1P32246 355 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 EPHX2P34913 555 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 GRIA4P48058 902 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PRIM2P49643 509 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 TUBP50607 506 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PDK3Q15120 406 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 VSTM1Q6UX27 236 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 UNC93AQ86WB7 457 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 KIAA2013Q8IYS2 634 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 KIAA0319LQ8IZA0 1049 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 KRT78Q8N1N4 520 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PCDH20Q8N6Y1 951 aaKnown RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 TERB1Q8NA31 727 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CLEC4DQ8WXI8 215 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 LENG9Q96B70 501 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RMND5BQ96G75 393 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MAGED4Q96JG8 741 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 CPXM1Q96SM3 734 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 LGMNQ99538 433 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 PCDH18Q9HCL0 1135 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MID1IP1Q9NPA3 183 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 DMAP1Q9NPF5 467 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 RRN3Q9NYV6 651 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 M0R3G1 203 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 BPGMP07738 259 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 RHOCP08134 193 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 ATP6V1B2P21281 511 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 DNAJB2P25686 324 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 NOS2P35228 1153 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 EEF1DP3Q658K8 133 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 PACS1Q6VY07 963 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 TFAP2DQ7Z6R9 452 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 DDHD1Q8NEL9 900 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 RGS18Q9NS28 235 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 PLLPQ9Y342 182 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 ERI2A8K979 691 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 PRR5-ARHGAP8B1AHC4 643 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 WBP4O75554 376 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 RECQL4O94761 1208 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 CPSF4O95639 269 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 CRTAMO95727 393 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 FCGR1AP12314 374 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 FASP25445 335 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 MAPK1P28482 360 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 GSTT1P30711 240 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 RPS7P62081 194 aaKnown RBP8.47□□□□□ -1.05
ALMS1-208ENST00000620466 ARHGAP8P85298 464 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 VGLL4Q14135 290 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 MFSD10Q14728 455 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 ATP6AP1LQ52LC2 224 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 C9orf131Q5VYM1 1079 aa8.47□□□□□ -1.05
ALMS1-208ENST00000620466 ACMSDQ8TDX5 336 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms