RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRPC3Q13507 836 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 FLOT2Q14254 428 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 BTLAQ7Z6A9 289 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 AFG1LQ8WV93 481 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CPA5Q8WXQ8 436 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 DDX1Q92499 740 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 FEM1CQ96JP0 617 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 NT5C1BQ96P26 610 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 MRPL9Q9BYD2 267 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 NAA50Q9GZZ1 169 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 AKIP1Q9NQ31 210 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ZNRF3Q9ULT6 936 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 DENND3A2RUS2 1198 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 VWA5AO00534 786 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ZW10O43264 779 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 UGT2B4P06133 528 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 FDX1P10109 184 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CD58P19256 250 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CCNCP24863 283 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 RFC1P35251 1148 aaPredicted RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 CAP2P40123 477 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ARL1P40616 181 aaPredicted RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 COPZ1P61923 177 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 GALK2Q01415 458 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 IFITM3Q01628 133 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 UBE2UQ5VVX9 321 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CIAPIN1Q6FI81 312 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 FAM122CQ6P4D5 195 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 PRR23CQ6ZRP0 262 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 GALNT7Q86SF2 657 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 HERC6Q8IVU3 1022 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 NIM1KQ8IY84 436 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS11-207ENST00000620429 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 GLIS1Q8NBF1 620 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 SLC4A11Q8NBS3 891 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ABHD11Q8NFV4 315 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 S100ZQ8WXG8 99 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 RTKNQ9BST9 563 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 EFHD1Q9BUP0 239 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 COQ10BQ9H8M1 238 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 SP140LQ9H930 580 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 NDFIP2Q9NV92 336 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 TXNDC16Q9P2K2 825 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 USTQ9Y2C2 406 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CROCCQ5TZA2 2017 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 IQANK1A0A1B0GTG1 560 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 SHOXO15266 292 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 NTRK1P04629 796 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 GSTM1P09488 218 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 PRKACAP17612 351 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 PTPN1P18031 435 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 RPL17P18621 184 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 TBXAS1P24557 533 aaPredicted RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 SERPINB1P30740 379 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 NME3Q13232 169 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 DLG2Q15700 870 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 NRF1Q16656 503 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 DUSP7Q16829 419 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ANO4Q32M45 955 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CCNJQ5T5M9 372 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 KRT39Q6A163 491 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 FRMD7Q6ZUT3 714 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 USP50Q70EL3 339 aaPredicted RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 OTOP3Q7RTS5 596 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CBWD2Q8IUF1 395 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ZNF577Q9BSK1 485 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 SYTL2Q9HCH5 934 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 PGAP2Q9UHJ9 254 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ENPP5Q9UJA9 477 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 PSME2Q9UL46 239 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CFL2Q9Y281 166 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CLUHO75153 1309 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 PROSCO94903 275 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ARP10275 920 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 ETS1P14921 441 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CFL1P23528 166 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 GRIA3P42263 894 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 TAS2R40P59535 323 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 HTRA3P83110 453 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 OCA2Q04671 838 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 DNASE1L3Q13609 305 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 POU6F1Q14863 301 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 CES4AQ5XG92 561 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 RHOT1Q8IXI2 618 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 C12orf56Q8IXR9 622 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms