RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 B4GALNT4Q76KP1 1039 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 GSTA5Q7RTV2 222 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 MFN1Q8IWA4 741 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 CCDC13Q8IYE1 715 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ALLCQ8N6M5 410 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 FAM71DQ8N9W8 422 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ANKK1Q8NFD2 765 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 OR52K2Q8NGK3 314 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 HTR3CQ8WXA8 447 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 RSAD2Q8WXG1 361 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 UBXN4Q92575 508 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ATP2A3Q93084 1043 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 BHMTQ93088 406 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 FATE1Q969F0 183 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ASIC4Q96FT7 647 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ZFYVE19Q96K21 471 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 LMLNQ96KR4 655 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 QKIQ96PU8 341 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 KXD1Q9BQD3 176 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 FERMT1Q9BQL6 677 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 BBS2Q9BXC9 721 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ACE2Q9BYF1 805 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 EBF3Q9H4W6 596 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ECT2Q9H8V3 914 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 HPS4Q9NQG7 708 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 PLK2Q9NYY3 685 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 CLEC4EQ9ULY5 219 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 FAM50BQ9Y247 325 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 OR51B4Q9Y5P0 310 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 NUMBLQ9Y6R0 609 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 OTOL1A6NHN0 477 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 NEDD8-MDP1E9PL57 170 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 J3KR12 359 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 SGK1O00141 431 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MATN3O15232 486 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 KCNN4O15554 427 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 TTI1O43156 1089 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MTSS1O43312 755 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 GCATO75600 419 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 GAS8O95995 478 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 JCHAINP01591 159 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 KRT14P02533 472 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 CYP17A1P05093 508 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 CISD3P0C7P0 127 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ADH5P11766 374 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ETS1P14921 441 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 VAV1P15498 845 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 DRG2P55039 364 aaKnown RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 SLC7A5Q01650 507 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 TNK2Q07912 1038 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 IL10RBQ08334 325 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 LMAN2Q12907 356 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 HNRNPDQ14103 355 aaKnown RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 GRM2Q14416 872 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 TEX44Q53QW1 395 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 TEX35Q5T0J7 233 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 HEATR6Q6AI08 1181 aaKnown RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 IL31Q6EBC2 164 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 TIGD7Q6NT04 549 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 C8orf74Q6P047 294 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ARHGAP36Q6ZRI8 547 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ATPAF2Q8N5M1 289 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MYRIPQ8NFW9 859 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 OR7D4Q8NG98 312 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 WFDC5Q8TCV5 224 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MAML1Q92585 1016 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 RTP4Q96DX8 246 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 CCDC114Q96M63 670 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ZNF599Q96NL3 588 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 XPO6Q96QU8 1125 aaKnown RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 VAT1Q99536 393 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ERP44Q9BS26 406 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 MUC3BQ9H195 1237 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 IGSF9Q9P2J2 1179 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
CPNE3-209ENST00000620393 HPCAL4Q9UM19 191 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ANAPC1Q9H1A4 1944 aa8.2□□□□□ -1.1
CPNE3-209ENST00000620393 ATG2AQ2TAZ0 1938 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TARSL2A2RTX5 802 aaKnown RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ZSCAN5CA6NGD5 496 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 KCNK1O00180 336 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ARNTLO00327 626 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CACNG3O60359 315 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ZMPSTE24O75844 475 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 STK10O94804 968 aaKnown RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PEX11BO96011 259 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 IFNB1P01574 187 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RHOXF2BP0C7M4 288 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms