RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 HESX1Q9UBX0 185 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF232Q9UNY5 417 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM50BQ9Y247 325 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CEP350Q5VT06 3117 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 C15orf38-AP3S2A0A0A6YYH1 394 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CASTOR2A6NHX0 329 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CASQ2O14958 399 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PYGLP06737 847 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 HNRNPCP07910 306 aaKnown RBP eCLIP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DHRS4L1P0CG22 281 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CKBP12277 381 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 MYL4P12829 197 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PEX2P28328 305 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SDC4P31431 198 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 NUDT2P50583 147 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 AQP4P55087 323 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 NKX3-2P78367 333 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 OGDHQ02218 1023 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FLOT2Q14254 428 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ARPINQ7Z6K5 226 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 TTC39CQ8N584 583 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 NIPA2Q8N8Q9 360 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 APPL2Q8NEU8 664 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 AGR3Q8TD06 166 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DDI1Q8WTU0 396 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 LZICQ8WZA0 190 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PGBD4Q96DM1 585 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 TWNKQ96RR1 684 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 MRPL45Q9BRJ2 306 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DHRS4Q9BTZ2 278 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ELOVL4Q9GZR5 314 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 C1orf21Q9H246 121 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC38A7Q9NVC3 462 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 HMGXB4Q9UGU5 601 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 MID2Q9UJV3 735 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PIK3R2O00459 728 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CILPO75339 1184 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 TNFAIP8O95379 198 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 IL1BP01584 269 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PMLP29590 882 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PNPLA4P41247 253 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ETV4P43268 484 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 HSPA13P48723 471 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SESN2P58004 480 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 YWHAZP63104 245 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FOLH1Q04609 750 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 BTKQ06187 659 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ELOAQ14241 798 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CYTH1Q15438 398 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SMAD1Q15797 465 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 PAN2Q504Q3 1202 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM91A1Q658Y4 838 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 C16orf46Q6P387 395 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DENND1BQ6P3S1 775 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 LRRC52Q8N7C0 313 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 C12orf29Q8N999 325 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 JOSD2Q8TAC2 188 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CATSPER2Q96P56 530 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 KCNK17Q96T54 332 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SPON2Q9BUD6 331 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM86C1Q9NVL1 165 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DDX18Q9NVP1 670 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DDX43Q9NXZ2 648 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 GALNT8Q9NY28 637 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SEPT10Q9P0V9 454 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DCDC2Q9UHG0 476 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 F5H423 210 aaPredicted RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 DCXO43602 365 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 RNASEH1O60930 286 aaKnown RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 CD48P09326 243 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 SRGAP2BP0DMP2 458 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 RALBP11234 206 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 VDRP11473 427 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 CCL5P13501 91 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 KCNE1P15382 129 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 CRHR1P34998 444 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 GNL1P36915 607 aaPredicted RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 ALDH1A3P47895 512 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 HDAC4P56524 1084 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 ESRRGP62508 458 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 ACAP1Q15027 740 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 SV2CQ496J9 727 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 IYDQ6PHW0 289 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 RBM44Q6ZP01 1051 aaKnown RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 C11orf96Q7Z7L8 435 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 SATL1Q86VE3 508 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 PDSS2Q86YH6 399 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 GALNT4Q8N4A0 578 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 DEPDC7Q96QD5 511 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 EBF4Q9BQW3 602 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 CNPY3Q9BT09 278 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 BCO2Q9BYV7 579 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 CDH22Q9UJ99 828 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 APPL1Q9UKG1 709 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 A0A1B0GVG6 124 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 E5RJQ4 531 aa7.12□□□□□ -1.27
SRGAP3-213ENST00000618999 E9PBE3 544 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms