RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ADGRE1Q14246 886 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 KIZQ2M2Z5 673 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 PIGGQ5H8A4 983 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 RARS2Q5T160 578 aaKnown RBP20.78■□□□□ 0.92
NEK3-208ENST00000618534 TMEM198Q66K66 360 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 RNF148Q8N7C7 305 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 USP13Q92995 863 aaPredicted RBP20.78■□□□□ 0.92
NEK3-208ENST00000618534 LRGUKQ96M69 825 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 TASP1Q9H6P5 420 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 PIGVQ9NUD9 493 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SETD4Q9NVD3 440 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SLC39A10Q9ULF5 831 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 A0A0G2JLL6 359 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 CFLARO15519 480 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 ZBTB24O43167 697 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 GRID2O43424 1007 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 TIMM44O43615 452 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 PIGNO95427 931 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 CRTAMO95727 393 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 RPL14P50914 215 aaKnown RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 TMEM62Q0P6H9 643 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 CYLC2Q14093 348 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 ARL13AQ5H913 290 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 FBXO47Q5MNV8 452 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 SYPL2Q5VXT5 272 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 ARHGAP22Q7Z5H3 698 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 PRRT2Q7Z6L0 340 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 RP9Q8TA86 221 aaKnown RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 MARK4Q96L34 752 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 PRICKLE1Q96MT3 831 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 CATSPER2Q96P56 530 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 NPY6RQ99463 290 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 DRC3Q9H069 523 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 SNX25Q9H3E2 840 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 EPB41L1Q9H4G0 881 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 ELP3Q9H9T3 547 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 CHRAC1Q9NRG0 131 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 RIMS3Q9UJD0 308 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 OTOFQ9HC10 1997 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 SCN4AP35499 1836 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 SBK3P0C264 359 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 SAT1P21673 171 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 CEACAM7Q14002 265 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 GRM3Q14832 879 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 ZYG11AQ6WRX3 759 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 MCMBPQ9BTE3 642 aa20.77■□□□□ 0.92
NEK3-208ENST00000618534 MLPHQ9BV36 600 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 COPS7BQ9H9Q2 264 aaPredicted RBP20.77■□□□□ 0.92
NEK3-208ENST00000618534 CCDC78A2IDD5 438 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 XPO1O14980 1071 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 JUNP05412 331 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 ENO3P13929 434 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 TPH1P17752 444 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 ERCC2P18074 760 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 CD68P34810 354 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 PPARGP37231 505 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 DPP6P42658 865 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 GLRBP48167 497 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 NDUFV1P49821 464 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 ATXN3P54252 364 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 CSE1LP55060 971 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 MS4A2Q01362 244 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 FRG1Q14331 258 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 PDCD2Q16342 344 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 LIPMQ5VYY2 423 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 ARMC3Q5W041 872 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 KCTD11Q693B1 232 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 ARMCX2Q7L311 632 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 BNIPLQ7Z465 357 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 TMEM151AQ8N4L1 468 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 RNF169Q8NCN4 708 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 NT5C3BQ969T7 300 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 NXF3Q9H4D5 531 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 ZNF385DQ9H6B1 395 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 PPP1R1BQ9UD71 204 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 ZDHHC2Q9UIJ5 367 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 AP4B1Q9Y6B7 739 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 BRCA1P38398 1863 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 PHGDHO43175 533 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 TFAP2AP05549 437 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 CYP2B6P20813 491 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 NOS2P35228 1153 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 GK3PQ14409 553 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 R3HDM1Q15032 1099 aaKnown RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 MARCH8Q5T0T0 291 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 LILRA2Q8N149 483 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 BHLHE22Q8NFJ8 381 aaPredicted RBP20.76■□□□□ 0.91
NEK3-208ENST00000618534 OPTNQ96CV9 577 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 C16orf70Q9BSU1 422 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 C1QTNF1Q9BXJ1 281 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 Q9H521 79 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 MID2Q9UJV3 735 aa20.76■□□□□ 0.91
NEK3-208ENST00000618534 COL1A2P08123 1366 aa20.75■□□□□ 0.91
NEK3-208ENST00000618534 STX16-NPEPL1H3BU86 382 aa20.75■□□□□ 0.91
NEK3-208ENST00000618534 CLDN5O00501 218 aa20.75■□□□□ 0.91
NEK3-208ENST00000618534 BEST1O76090 585 aa20.75■□□□□ 0.91
NEK3-208ENST00000618534 RECQL4O94761 1208 aa20.75■□□□□ 0.91
NEK3-208ENST00000618534 TFEBP19484 476 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms