RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 RHOT1Q8IXI2 618 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 KIAA2013Q8IYS2 634 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SHCBP1Q8NEM2 672 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 WNT8BQ93098 351 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MRPL1Q9BYD6 325 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 AP5M1Q9H0R1 490 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 RBM38Q9H0Z9 239 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TCF7L2Q9NQB0 619 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TMPRSS4Q9NRS4 437 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 GRHL1Q9NZI5 618 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SLC8A2Q9UPR5 921 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TRIM64A6NGJ6 449 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TRIM64BA6NI03 449 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PMM2O15305 246 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MAGEB2O15479 319 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 RNGTTO60942 597 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 USP1O94782 785 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 T-ENOLP0DO92 83 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 P4HA1P13674 534 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CREB1P16220 341 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PRKCAP17252 672 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CHRNA3P32297 505 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 STX2P32856 288 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SLC26A2P50443 739 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SLC5A3P53794 718 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CAP1Q01518 475 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SOX4Q06945 474 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MAP2K5Q13163 448 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 THOC5Q13769 683 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PXDC1Q5TGL8 231 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 DENND2CQ68D51 928 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PAOXQ6QHF9 649 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TMC5Q6UXY8 1006 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 KCTD6Q8NC69 237 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ARRDC4Q8NCT1 418 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ADAM32Q8TC27 787 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 FAM149B1Q96BN6 582 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TMEM176AQ96HP8 235 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 GCOM2Q9BZD3 368 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CCDC134Q9H6E4 229 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PIH1D1Q9NWS0 290 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 NCKIPSDQ9NZQ3 722 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 KCNN3Q9UGI6 736 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MAGED2Q9UNF1 606 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 POLHQ9Y253 713 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 NME7Q9Y5B8 376 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CASTOR2A6NHX0 329 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CST8O60676 142 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 AOC2O75106 756 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 ATF2P15336 505 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 ZNF12P17014 697 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CXCR2P25025 360 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 NR2C2P49116 596 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RAB15P59190 212 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 GPS1Q13098 491 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 FASTKD3Q14CZ7 662 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CNGA2Q16280 664 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 FSCN1Q16658 493 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PLEKHA7Q6IQ23 1121 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PMF1Q6P1K2 205 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 POTEHQ6S545 545 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 UTS2BQ765I0 119 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 TAS2R42Q7RTR8 314 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RASSF3Q86WH2 238 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RFX6Q8HWS3 928 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 METTL2AQ96IZ6 378 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 MIPEPQ99797 713 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RHOBTB2Q9BYZ6 727 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 ABCG4Q9H172 646 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RUBCNLQ9H714 662 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 TYW5A2RUC4 315 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 TMEM191CA6NGB0 347 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 C2orf81A6NN90 581 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 SOBPA7XYQ1 873 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 F8W810 466 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RGS16O15492 202 aaPredicted RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CLOCKO15516 846 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 GAS2O43903 313 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 LRCH4O75427 683 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PDGFRAP16234 1089 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 POLR2CP19387 275 aaPredicted RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 HNF1BP35680 557 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PTPN9P43378 593 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PSEN2P49810 448 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 ARSEP51690 589 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 GDF10P55107 478 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 SMARCB1Q12824 385 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 PDAP1Q13442 181 aaKnown RBP5.67□□□□□ -1.5
CPNE4-214ENST00000617767 GRM2Q14416 872 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 SNX17Q15036 470 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CLVS2Q5SYC1 327 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 RNF43Q68DV7 783 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 AAGABQ6PD74 315 aa5.67□□□□□ -1.5
CPNE4-214ENST00000617767 CORO6Q6QEF8 472 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms