RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 RAMP2O60895 175 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 KCNA5P22460 613 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 FCARP24071 287 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 CHKAP35790 457 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 XRCC4Q13426 336 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 PRKD1Q15139 912 aaPredicted RBP16.64■□□□□ 0.26
SNAP47-213ENST00000617596 AFMIDQ63HM1 303 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 CDKL3Q8IVW4 592 aaPredicted RBP16.64■□□□□ 0.26
SNAP47-213ENST00000617596 CCDC89Q8N998 374 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 ASIC4Q96FT7 647 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 RUNDC3BQ96NL0 473 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 GDE1Q9NZC3 331 aa16.64■□□□□ 0.26
SNAP47-213ENST00000617596 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.26
SNAP47-213ENST00000617596 A0A1B0GVM2 712 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 TCAF2A6NFQ2 919 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 FAM187AA6NFU0 413 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 H0Y626 953 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 PPP1R12AO14974 1030 aaPredicted RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 CLDN11O75508 207 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 RPL21P46778 160 aaKnown RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 CARSP49589 748 aaKnown RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 POLD3Q15054 466 aaPredicted RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 HEATR6Q6AI08 1181 aaKnown RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 ATPAF2Q8N5M1 289 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 LZTR1Q8N653 840 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 HJURPQ8NCD3 748 aaPredicted RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 OR7D4Q8NG98 312 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 HTR3CQ8WXA8 447 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 GUCD1Q96NT3 240 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 ACTR5Q9H9F9 607 aaPredicted RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 USP15Q9Y4E8 981 aaPredicted RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 CAPN7Q9Y6W3 813 aa16.64■□□□□ 0.25
SNAP47-213ENST00000617596 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.25
SNAP47-213ENST00000617596 DOCK4Q8N1I0 1966 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.63■□□□□ 0.25
SNAP47-213ENST00000617596 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 J3KR12 359 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 MYBL2P10244 700 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 MX2P20592 715 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
SNAP47-213ENST00000617596 LMNB2Q03252 620 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 PPIDQ08752 370 aaKnown RBP16.63■□□□□ 0.25
SNAP47-213ENST00000617596 ZNF177Q13360 481 aaPredicted RBP16.63■□□□□ 0.25
SNAP47-213ENST00000617596 PTK6Q13882 451 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 FYB2Q5VWT5 728 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 DUPD1Q68J44 220 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 CXorf57Q6NSI4 855 aaKnown RBP16.63■□□□□ 0.25
SNAP47-213ENST00000617596 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 ADGRG2Q8IZP9 1017 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 USP33Q8TEY7 942 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 ACTL7AQ9Y615 435 aa16.63■□□□□ 0.25
SNAP47-213ENST00000617596 HACD1B0YJ81 288 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 NEDD8-MDP1E9PL57 170 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 NDUFAB1O14561 156 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 MAFKO60675 156 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RHOCP08134 193 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 STIP1P31948 543 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RPL22P35268 128 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 ADCY8P40145 1251 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 MAPKAPK2P49137 400 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 NDST2P52849 883 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GPS1Q13098 491 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 ANO4Q32M45 955 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 MPPE1Q53F39 396 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 LY6G5CQ5SRR4 150 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 CHST9Q7L1S5 443 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 DEFB123Q8N688 67 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 BPIFB1Q8TDL5 484 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 FGF14Q92915 247 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 HDAC11Q96DB2 347 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 ZNF419Q96HQ0 510 aaPredicted RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 KXD1Q9BQD3 176 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RPP25Q9BUL9 199 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 PLA2G2FQ9BZM2 168 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GDF3Q9NR23 364 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 IPO11Q9UI26 975 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 CD207Q9UJ71 328 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 TYW5A2RUC4 315 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 H0YHG0 523 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RNF103O00237 685 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 NCAM2O15394 837 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RASSF9O75901 435 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 LUC7L3O95232 432 aaKnown RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 LAMP2P13473 410 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GLDCP23378 1020 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 IVDP26440 423 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 MZF1P28698 734 aaPredicted RBP16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GNA12Q03113 381 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 WASHC5Q12768 1159 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 ZBTB17Q13105 803 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 CDH18Q13634 790 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GRM2Q14416 872 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 FAXCQ5TGI0 409 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms