RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PLD2O14939 933 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SOD2P04179 222 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FGRP09769 529 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 GRB10Q13322 594 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SETDB1Q15047 1291 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ARL9Q6T311 187 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZNF677Q86XU0 584 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 POTEDQ86YR6 584 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 DKKL1Q9UK85 242 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SMG5Q9UPR3 1016 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 MCM3APO60318 1980 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CCDC162PA2VCL2 907 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FZD9O00144 591 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 OGTO15294 1046 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 GPC4O75487 556 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TCN2P20062 427 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RABIFP47224 123 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ABCE1P61221 599 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 MORC3Q14149 939 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 LONRF2Q1L5Z9 754 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 BICRALQ6AI39 1079 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 UBE2R2Q712K3 238 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 LRRC71Q8N4P6 559 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TAPBPLQ9BX59 468 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 FOXP1Q9H334 677 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 MTO1Q9Y2Z2 717 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 RAMP2O60895 175 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 HCAR3P49019 387 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 BMP2KLQ5H9B9 411 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 OTUD3Q5T2D3 398 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FUT10Q6P4F1 479 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TMC6Q7Z403 805 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PLXDC1Q8IUK5 500 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 C10orf53Q8N6V4 93 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SERHL2Q9H4I8 314 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CNTN3Q9P232 1028 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ASTN1O14525 1302 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 LILRB3O75022 631 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SNUPNO95149 360 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 CCNB1P14635 433 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NPR3P17342 541 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CTBP2P56545 445 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 GJA9P57773 515 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PTPN21Q16825 1174 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NIPA1Q7RTP0 329 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PEX26Q7Z412 305 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HDDC2Q7Z4H3 204 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 OR9Q1Q8NGQ5 310 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ATP8B4Q8TF62 1192 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EPS15L1Q9UBC2 864 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ANKDD1BA6NHY2 528 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 WDPCPO95876 746 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 AKR1B1P15121 316 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ACTR1BP42025 376 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SLC20A2Q08357 652 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SMU1Q2TAY7 513 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 C11orf96Q7Z7L8 435 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 FBXL6Q8N531 539 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PRR7Q8TB68 274 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ATL1Q8WXF7 558 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 DACT3Q96B18 629 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 DHX35Q9H5Z1 703 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 ANLNQ9NQW6 1124 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SERINC1Q9NRX5 453 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RBM22Q9NW64 420 aaKnown RBP eCLIP3.41□□□□□ -1.86
LPP-220ENST00000617246 IQANK1A0A1B0GTG1 560 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 OR5K4A6NMS3 321 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 OR10H2O60403 315 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 UBA1P22314 1058 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 CCR10P46092 362 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SLC9A5Q14940 896 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EDAQ92838 391 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CAPN10Q9HC96 672 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CDH9Q9ULB4 789 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CDY1Q9Y6F8 540 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 AGPSO00116 658 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TRAFD1O14545 582 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 FGF10O15520 208 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 HNRNPRO43390 633 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 ATP9AO75110 1047 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NEK3P51956 506 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TAF13Q15543 124 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TSHZ3Q63HK5 1081 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 DNAAF5Q86Y56 855 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 KBTBD2Q8IY47 623 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PAIP2Q9BPZ3 127 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 FDXACB1Q9BRP7 624 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 HERC2P3Q9BVR0 1158 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 FZD3Q9NPG1 666 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ZNF148Q9UQR1 794 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TK2O00142 265 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RFPL3O75679 317 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 KCNA2P16389 499 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PFKLP17858 780 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 S100A7P31151 101 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HNMTP50135 292 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ACY1Q03154 408 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 YTHDF3Q7Z739 585 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms