RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	SPON2	Q9BUD6	331 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	MKRN2	Q9H000	416 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	NOL6	Q9H6R4	1146 aa	Known RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	PRDM16	Q9HAZ2	1276 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	PCDH18	Q9HCL0	1135 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	SHROOM3	Q8TF72	1996 aa		18.82	■□□□□ 0.6
CADM1-222	ENST00000616271	RALGAPA1	Q6GYQ0	2036 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	CBX4	O00257	560 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	HR	O43593	1189 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SIN3B	O75182	1162 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	ZMPSTE24	O75844	475 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SRC	P12931	536 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	ERCC2	P18074	760 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	GLDC	P23378	1020 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	GJC1	P36383	396 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	ACVRL1	P37023	503 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SLC1A1	P43005	524 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	NOP2	P46087	812 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	CLCN6	P51797	869 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	NDST2	P52849	883 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	CDH6	P55285	790 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SLC20A2	Q08357	652 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SRSF5	Q13243	272 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	BYSL	Q13895	437 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	DPYS	Q14117	519 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	KRT81	Q14533	505 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	PARP15	Q460N3	678 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	METTL3	Q86U44	580 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	C11orf74	Q86VG3	221 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	TMPRSS6	Q8IU80	811 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	TXLNB	Q8N3L3	684 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	CCDC112	Q8NEF3	446 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	FRS2	Q8WU20	508 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	NKD2	Q969F2	451 aa	Predicted RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	SPACA7	Q96KW9	195 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	CALR3	Q96L12	384 aa	Known RBP	18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	PHOX2B	Q99453	314 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	HPCAL4	Q9UM19	191 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	TFR2	Q9UP52	801 aa		18.81	■□□□□ 0.6
CADM1-222	ENST00000616271	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	BTNL10	A8MVZ5	291 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	RASA4B	C9J798	803 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	PJA2	O43164	708 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	RASA4	O43374	803 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	ZNF217	O75362	1048 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	PLA2G5	P39877	138 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	P2RY2	P41231	377 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	ARSE	P51690	589 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	GEMIN4	P57678	1058 aa	Known RBP	18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	ARF5	P84085	180 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	C9orf64	Q5T6V5	341 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	CEP68	Q76N32	757 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	ATP11C	Q8NB49	1132 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	TSC1	Q92574	1164 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	PRCC	Q92733	491 aa	Predicted RBP	18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	PTPRN2	Q92932	1015 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	FAM122A	Q96E09	287 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	SIPA1	Q96FS4	1042 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	CSPG4P5	Q96PW8	444 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	SLC6A17	Q9H1V8	727 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	MTG2	Q9H4K7	406 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	ABCA7	Q8IZY2	2146 aa		18.8	■□□□□ 0.6
CADM1-222	ENST00000616271	RCCD1	A6NED2	376 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	DCLK1	O15075	740 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	MT-CO1	P00395	513 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	SERPINH1	P50454	418 aa	Known RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	SIM2	Q14190	667 aa	Predicted RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	ELAVL3	Q14576	367 aa	Known RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	PDK2	Q15119	407 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	DLG2	Q15700	870 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	MAP7D1	Q3KQU3	841 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	ACCSL	Q4AC99	568 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	LRRC38	Q5VT99	294 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	ZNF776	Q68DI1	518 aa	Predicted RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	C11orf63	Q6NUN7	778 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	LINGO4	Q6UY18	593 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	KIAA1328	Q86T90	577 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	LZTR1	Q8N653	840 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	HMCES	Q96FZ2	354 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	ZNF670	Q9BS34	389 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	KLC2	Q9H0B6	622 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	RSPH9	Q9H1X1	276 aa	Predicted RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	LRRC19	Q9H756	370 aa		18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	USP36	Q9P275	1121 aa	Known RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	SMG5	Q9UPR3	1016 aa	Known RBP	18.79	■□□□□ 0.6
CADM1-222	ENST00000616271	ARHGAP6	O43182	974 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	KDELR3	O43731	214 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	BUB1B	O60566	1050 aa	Predicted RBP	18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	RNASEH1	O60930	286 aa	Known RBP	18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	LMNA	P02545	664 aa	Known RBP	18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	MRE11	P49959	708 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	ZBTB16	Q05516	673 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	SERINC3	Q13530	473 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	DPYSL3	Q14195	570 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	ATP13A4	Q4VNC1	1196 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	AFMID	Q63HM1	303 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	C22orf39	Q6P5X5	142 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	TMCO3	Q6UWJ1	677 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms