RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CDH8P55286 799 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 DPYSQ14117 519 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 BBS12Q6ZW61 710 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 BRSK2Q8IWQ3 736 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 L3MBTL3Q96JM7 780 aaPredicted RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 SCUBE2Q9NQ36 999 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 PNPOQ9NVS9 261 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 TRNAU1APQ9NX07 287 aaKnown RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 UBA2Q9UBT2 640 aaPredicted RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 MARC1Q5VT66 337 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 SPESP1Q6UW49 350 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 UTS2BQ765I0 119 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 PIGWQ7Z7B1 504 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 MIB1Q86YT6 1006 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 ARL10Q8N8L6 244 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 SPOCK2Q92563 424 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 CPB2Q96IY4 423 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 PDCD2LQ9BRP1 358 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 PXMP2Q9NR77 195 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 NUDT5Q9UKK9 219 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 TMEM150BA6NC51 233 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 F5H5T6 163 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 IL6P05231 212 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 S100A1P23297 94 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 ATP5F1P24539 256 aaPredicted RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 USP46P62068 366 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 EGFLAMQ63HQ2 1017 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 HPS6Q86YV9 775 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 C10orf107Q8IVU9 208 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 KBTBD8Q8NFY9 601 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 OR52K1Q8NGK4 314 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 EBNA1BP2Q99848 306 aaKnown RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 RRN3P2A6NIE6 340 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 ELMSAN1Q6PJG2 1045 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 DNAJB14Q8TBM8 379 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 HAS1Q92839 578 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 ACE2Q9BYF1 805 aaPredicted RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 ZNF180Q9UJW8 692 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 RAB26Q9ULW5 256 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 AP3M1Q9Y2T2 418 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 PRR23AA6NEV1 266 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 E5RJQ4 531 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 BPGMP07738 259 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 ITGA2BP08514 1039 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 PSMB4P28070 264 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 YWHAZP63104 245 aaKnown RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 GNEQ9Y223 722 aaKnown RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 USP20Q9Y2K6 914 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 GRIN2DO15399 1336 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 C2orf71A6NGG8 1288 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 TSPAN19P0C672 248 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 MYL12AP19105 171 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 CBX3Q13185 183 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 MZT2BQ6NZ67 158 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 DDX53Q86TM3 631 aaKnown RBP19.13■□□□□ 0.65
SPAST-203ENST00000615843 AKAP14Q86UN6 197 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 TXNRD3Q86VQ6 643 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 COX4I2Q96KJ9 171 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 VAT1Q99536 393 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 CDH19Q9H159 772 aa19.13■□□□□ 0.65
SPAST-203ENST00000615843 H3BN98 237 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 UPP2O95045 317 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 SLC11A2P49281 568 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 OXCT1P55809 520 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 LAMTOR4Q0VGL1 99 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 MILR1Q7Z6M3 343 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 KRT78Q8N1N4 520 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 IL22Q9GZX6 179 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ATXN3LQ9H3M9 355 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 MRPL39Q9NYK5 338 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 TMX2Q9Y320 296 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 BAZ2BQ9UIF8 2168 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 ALDH1A1P00352 501 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ADRB2P07550 413 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 NUP62P37198 522 aaPredicted RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 TAS2R40P59535 323 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 SLC41A1Q8IVJ1 513 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 HGH1Q9BTY7 390 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 KCNMB3Q9NPA1 279 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ZNF624Q9P2J8 865 aaPredicted RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 GMPPBQ9Y5P6 360 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 KCNH1O95259 989 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 SLC25A27O95847 323 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 NAA20P61599 178 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ZNF484Q5JVG2 852 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 DENND5AQ6IQ26 1287 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 PSTKQ8IV42 348 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 ZNF540Q8NDQ6 660 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 CAMKK2Q96RR4 588 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 DKK3Q9UBP4 350 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 CLUHO75153 1309 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 NWD1Q149M9 1564 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 CCDC182A6NF36 153 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 LSM1O15116 133 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms