RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ABCG1P45844 678 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 OXR1Q8N573 874 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CCDC107Q8WV48 283 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 NSMCE3Q96MG7 304 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 TASP1Q9H6P5 420 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CNTNAP4Q9C0A0 1308 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 RASGRP1O95267 797 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 IFNA6P05013 189 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 GSTT2BP0CG30 244 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 MAGEA3P43357 314 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 PLD1Q13393 1074 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 SLC5A9Q2M3M2 681 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 A0A075B6Q4 140 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 RGS14O43566 566 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 USP17L8P0C7I0 530 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 DGCR6Q14129 220 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 MYBPC3Q14896 1274 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 COBLL1Q53SF7 1204 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 TDRPQ86YL5 185 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 DEPDC4Q8N2C3 294 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 LPAR1Q92633 364 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 MASTLQ96GX5 879 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 C2orf81A6NN90 581 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 ATP1A1P05023 1023 aaKnown RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 TAF13Q15543 124 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 ACAD10Q6JQN1 1059 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CPXCR1Q8N123 301 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 MPP5Q8N3R9 675 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 TMCO6Q96DC7 493 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 DCLK3Q9C098 648 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 AFF4Q9UHB7 1163 aaKnown RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 HIF3AQ9Y2N7 669 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 HEY1Q9Y5J3 304 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 RAD54BQ9Y620 910 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 FMN2Q9NZ56 1722 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 OGNP20774 298 aaKnown RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 RGS4P49798 205 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CCDC126Q96EE4 140 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CD274Q9NZQ7 290 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 NFAT5O94916 1531 aa9.41□□□□□ -0.9
COL12A1-211ENST00000615798 CHD4Q14839 1912 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ZSCAN5BA6NJL1 495 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SPTLC1O15269 473 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF37AP17032 561 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SCNN1BP51168 640 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 HLFQ16534 295 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 RNF219Q5W0B1 726 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 NXNL1Q96CM4 212 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 CCNB1IP1Q9NPC3 277 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 PLIN3O60664 434 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 NFKB1P19838 968 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 RPA1P27694 616 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ACTR2P61160 394 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 GRIK3Q13003 919 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 HERC3Q15034 1050 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 DMRTB1Q96MA1 342 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 RIT2Q99578 217 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 GPATCH1Q9BRR8 931 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 MTG1Q9BT17 334 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 INPPL1O15357 1258 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ALDH5A1P51649 535 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 EFNA5P52803 228 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 VPS33BQ9H267 617 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SP110Q9HB58 689 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 MRPS7Q9Y2R9 242 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 GPD2P43304 727 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 OR2B6P58173 313 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 CREB5Q02930 508 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 DPYSQ14117 519 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SQLEQ14534 574 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 OR14K1Q8NGZ2 314 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 NSMCE2Q96MF7 247 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 FGRP09769 529 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 INTS11Q5TA45 600 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 RASSF1Q9NS23 344 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 A0A1B0GVC2 190 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 DARSP14868 501 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 UCHL3P15374 230 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 TCP10Q12799 353 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 IL18Q14116 193 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SAMD4BQ5PRF9 694 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ANKRD40Q6AI12 368 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 DEFB107AQ8IZN7 70 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms