RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 PIGHQ14442 188 aaPredicted RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 TIGD5Q53EQ6 642 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 RAB41Q5JT25 222 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 FAM47EQ6ZV65 393 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 IFT20Q8IY31 132 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 THEM5Q8N1Q8 247 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 NELL1Q92832 810 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 TOP1MTQ969P6 601 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 FUBP3Q96I24 572 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS11-206ENST00000614944 PAWRQ96IZ0 340 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 ALPK1Q96QP1 1244 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 DUSP16Q9BY84 665 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ATP13A3Q9H7F0 1226 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 CAAP1Q9H8G2 361 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 KCNN3Q9UGI6 736 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 AMFRQ9UKV5 643 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 GPSM3Q9Y4H4 160 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 VWA8A3KMH1 1905 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ZNF487B1APH4 448 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 DDX3YO15523 660 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 TBC1D4O60343 1298 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 SRGAP2O75044 1071 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PRLP01236 227 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 BPIFB3P59826 476 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 POLR2GP62487 172 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS11-206ENST00000614944 SF3A3Q12874 501 aaKnown RBP eCLIP8.99□□□□□ -0.975e-6■■■■□ 19.6
VPS11-206ENST00000614944 PPIGQ13427 754 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS11-206ENST00000614944 INTS6LQ5JSJ4 861 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 ERMARDQ5T6L9 678 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 FAM122CQ6P4D5 195 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PEX26Q7Z412 305 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 SATL1Q86VE3 508 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 XYLT1Q86Y38 959 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 NXPE3Q969Y0 559 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ZNF184Q99676 751 aaPredicted RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 RTP3Q9BQQ7 232 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 LRRC1Q9BTT6 524 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 SIAEQ9HAT2 523 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ACP6Q9NPH0 428 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 TSPAN16Q9UKR8 245 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 LRFN2Q9ULH4 789 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 IFT52Q9Y366 437 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PCDHA3Q9Y5H8 950 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 B8ZZF3 427 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ENC1O14682 589 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ATP1A1P05023 1023 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 MAGEA11P43364 429 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 DNAJC3Q13217 504 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PPP2R5EQ16537 467 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PTPN20Q4JDL3 420 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 POLNQ7Z5Q5 900 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 OR6B3Q8NGW1 331 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ANGPTL6Q8NI99 470 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 INTS12Q96CB8 462 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 C18orf8Q96DM3 657 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 MCOLN1Q9GZU1 580 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 GOLGA2P5Q9HBQ8 144 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 DDX43Q9NXZ2 648 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 CFHP08603 1231 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ESRRAP11474 423 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 PPARGP37231 505 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 TBX4P57082 545 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 RUNX1T1Q06455 604 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 RPS6KA1Q15418 735 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 GOLGA7BQ2TAP0 167 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 PPP1R26Q5T8A7 1209 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 METTL2BQ6P1Q9 378 aaKnown RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 LRIG3Q6UXM1 1119 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 LRRTM3Q86VH5 581 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 PHOSPHO2Q8TCD6 241 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TRIM43Q96BQ3 446 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 ZNF317Q96PQ6 595 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 TRIM62Q9BVG3 475 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 DPH5Q9H2P9 285 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 EMC3Q9P0I2 261 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CYTH4Q9UIA0 394 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 MYH10P35580 1976 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 H7C4K7 107 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 OR6B1O95007 311 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 KLHL2O95198 593 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ZBTB11O95625 1053 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 ZNF12P17014 697 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 PSMA3P25788 255 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 AFF1P51825 1210 aaKnown RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 HTRA4P83105 476 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 WSCD1Q658N2 575 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 NIPAL1Q6NVV3 410 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 BNIPLQ7Z465 357 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CREG2Q8IUH2 290 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ABI1Q8IZP0 508 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 AGGF1Q8N302 714 aaeCLIP8.98□□□□□ -0.97
VPS11-206ENST00000614944 RIN3Q8TB24 985 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CPA5Q8WXQ8 436 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TSNARE1Q96NA8 513 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SAMD11Q96NU1 681 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TTPALQ9BTX7 342 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms