RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PTPRCAPQ14761 206 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CRYMQ14894 314 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 POLD3Q15054 466 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 TPSAB1Q15661 275 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 DLG2Q15700 870 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 STXBP5Q5T5C0 1151 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 EMC10Q5UCC4 262 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 GKAP1Q5VSY0 366 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 IL31Q6EBC2 164 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 LRRC8BQ6P9F7 803 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 FBXO46Q6PJ61 603 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 LINGO4Q6UY18 593 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 NECAB2Q7Z6G3 386 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CMC1Q7Z7K0 106 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC26A11Q86WA9 606 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 C10orf67Q8IYJ2 551 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 HS6ST3Q8IZP7 471 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 NDUFAF2Q8N183 169 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RTL3Q8N8U3 475 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 ATP6V0D2Q8N8Y2 350 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MCUQ8NE86 351 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 BTN2A3PQ96KV6 586 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZNF317Q96PQ6 595 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 TMEM175Q9BSA9 504 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TRIM62Q9BVG3 475 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 FSD1LQ9BXM9 530 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZYG11BQ9C0D3 744 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZNF395Q9H8N7 513 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 XAB2Q9HCS7 855 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZNF358Q9NW07 568 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SPG21Q9NZD8 308 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 BFARQ9NZS9 450 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZFATQ9P243 1243 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TXNDC16Q9P2K2 825 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC2A6Q9UGQ3 507 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC24A2Q9UI40 661 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PRDM4Q9UKN5 801 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 YIPF1Q9Y548 306 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PCDHA11Q9Y5I1 949 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZFP37Q9Y6Q3 630 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 BPTFQ12830 3046 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PRUNE2Q8WUY3 3088 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 DOCK6Q96HP0 2047 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 IQANK1A0A1B0GTG1 560 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 HMX2A2RU54 273 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZNF840PA6NDX5 716 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CBX4O00257 560 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 NDC80O14777 642 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 NCAM2O15394 837 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 BNIP3LO60238 219 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RAMP2O60895 175 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 DNAJC6O75061 913 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 FGF18O76093 207 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CXCL14O95715 111 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 AP2A1O95782 977 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 C1QAP02745 245 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CNPP09543 421 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 MYOGP15173 224 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 HMGA1P17096 107 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 TACR2P21452 398 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CORO1AP31146 461 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 AVPR1AP37288 418 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TUFMP49411 452 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 HARS2P49590 506 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 LIG3P49916 1009 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CTBP1Q13363 440 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 IHHQ14623 411 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PTPRRQ15256 657 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TRIP4Q15650 581 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 SPRED3Q2MJR0 410 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 HECTD3Q5T447 861 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ARTNQ5T4W7 220 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC8B1Q6J4K2 584 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZCCHC23Q6ZST2 131 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TPGS1Q6ZTW0 290 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RBM23Q86U06 439 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 LDB1Q86U70 411 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 CACNA2D3Q8IZS8 1091 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC39A11Q8N1S5 342 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ARHGAP18Q8N392 663 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SPATA6LQ8N4H0 392 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MAB21L3Q8N8X9 362 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 KLHL23Q8NBE8 558 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ARMC2Q8NEN0 867 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ACVR1CQ8NER5 493 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PDCD6IPQ8WUM4 868 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 FAM136AQ96C01 138 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MOCOSQ96EN8 888 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PITPNM3Q9BZ71 974 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 IQCGQ9H095 443 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 GBA3Q9H227 469 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 VPS11Q9H270 941 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 GLOD4Q9HC38 313 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZNF334Q9HCZ1 680 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 MRPL17Q9NRX2 175 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 IARS2Q9NSE4 1012 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms