RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DRD1P21728 446 aa15.02■□□□□ -0
CD48-203ENST00000613788 TNFRSF4P43489 277 aa15.02■□□□□ -0
CD48-203ENST00000613788 ATP5OP48047 213 aa15.02■□□□□ -0
CD48-203ENST00000613788 GEMIN4P57678 1058 aaKnown RBP15.02■□□□□ -0
CD48-203ENST00000613788 CKAP4Q07065 602 aaKnown RBP15.02■□□□□ -0
CD48-203ENST00000613788 IL10RBQ08334 325 aa15.02■□□□□ -0
CD48-203ENST00000613788 SLC20A2Q08357 652 aa15.02■□□□□ -0
CD48-203ENST00000613788 GRSF1Q12849 480 aaKnown RBP eCLIP15.02■□□□□ -0
CD48-203ENST00000613788 SIX1Q15475 284 aaPredicted RBP15.02■□□□□ -0
CD48-203ENST00000613788 WHAMMP3Q1A5X7 153 aa15.02■□□□□ -0
CD48-203ENST00000613788 FUT11Q495W5 492 aa15.02■□□□□ -0
CD48-203ENST00000613788 TPRG1Q6ZUI0 275 aa15.02■□□□□ -0
CD48-203ENST00000613788 ADIPOR2Q86V24 386 aa15.02■□□□□ -0
CD48-203ENST00000613788 ZC3H18Q86VM9 953 aaKnown RBP15.02■□□□□ -0
CD48-203ENST00000613788 CCDC33Q8N5R6 958 aa15.02■□□□□ -0
CD48-203ENST00000613788 NSMCE1Q8WV22 266 aa15.02■□□□□ -0
CD48-203ENST00000613788 UCMAQ8WVF2 138 aa15.02■□□□□ -0
CD48-203ENST00000613788 TFB1MQ8WVM0 346 aaKnown RBP15.02■□□□□ -0
CD48-203ENST00000613788 FAM3CQ92520 227 aa15.02■□□□□ -0
CD48-203ENST00000613788 AP1M1Q9BXS5 423 aa15.02■□□□□ -0
CD48-203ENST00000613788 CIPCQ9C0C6 399 aa15.02■□□□□ -0
CD48-203ENST00000613788 SP110Q9HB58 689 aa15.02■□□□□ -0
CD48-203ENST00000613788 CD320Q9NPF0 282 aa15.02■□□□□ -0
CD48-203ENST00000613788 ARHGEF3Q9NR81 526 aa15.02■□□□□ -0
CD48-203ENST00000613788 ELOVL2Q9NXB9 296 aa15.02■□□□□ -0
CD48-203ENST00000613788 SMARCAL1Q9NZC9 954 aa15.02■□□□□ -0
CD48-203ENST00000613788 MUTYHQ9UIF7 546 aa15.02■□□□□ -0
CD48-203ENST00000613788 R3HDM2Q9Y2K5 976 aaKnown RBP15.02■□□□□ -0
CD48-203ENST00000613788 MAFKO60675 156 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 PRAMEF11O60813 436 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 ECT2LQ008S8 904 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 PPIDQ08752 370 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 AP1B1Q10567 949 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 BYSLQ13895 437 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 PON2Q15165 354 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 SLC45A4Q5BKX6 768 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 TMEM196Q5HYL7 178 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 NAIF1Q69YI7 327 aaPredicted RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 DRICH1Q6PGQ1 229 aaPredicted RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 DARS2Q6PI48 645 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 TXNDC11Q6PKC3 985 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 ZNF852Q6ZMS4 543 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 CDKL3Q8IVW4 592 aaPredicted RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 CCDC26Q8TAB7 109 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 SLC35B2Q8TB61 432 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 C1orf54Q8WWF1 131 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 FATE1Q969F0 183 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 ZNF599Q96NL3 588 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 UHRF1Q96T88 793 aaPredicted RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 LGMNQ99538 433 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 FAM118BQ9BPY3 351 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 FBRSL1Q9HCM7 1045 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 VPS51Q9UID3 782 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 SLC25A13Q9UJS0 675 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 CA14Q9ULX7 337 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 PLA2G4CQ9UP65 541 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 MRPS17Q9Y2R5 130 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 MRFAP1Q9Y605 127 aa15.02□□□□□ -0.01
CD48-203ENST00000613788 TCF20Q9UGU0 1960 aaKnown RBP15.02□□□□□ -0.01
CD48-203ENST00000613788 TICRRQ7Z2Z1 1910 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 PRRT4C9JH25 899 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 J3KR12 359 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 MATN3O15232 486 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 MTSS1O43312 755 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 LIASO43766 372 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 SNAP91O60641 907 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 ZMPSTE24O75844 475 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 DLDP09622 509 aaKnown RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 NNMTP40261 264 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 NUMBP49757 651 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 MESP2Q0VG99 397 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 IER5LQ5T953 404 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 TMEM215Q68D42 235 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 ARHGAP36Q6ZRI8 547 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 METTL3Q86U44 580 aaKnown RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 CCDC13Q8IYE1 715 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 PRELID2Q8N945 189 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 CASKIN2Q8WXE0 1202 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 ATG4AQ8WYN0 398 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 NKD2Q969F2 451 aaPredicted RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 NECAB3Q96P71 396 aaPredicted RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 NELL2Q99435 816 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 DNPEPQ9ULA0 475 aa15.01□□□□□ -0.01
CD48-203ENST00000613788 DRG1Q9Y295 367 aaKnown RBP15.01□□□□□ -0.01
CD48-203ENST00000613788 BCLAF3A2AJT9 711 aaKnown RBP15□□□□□ -0.01
CD48-203ENST00000613788 CCDC188H7C350 402 aa15□□□□□ -0.01
CD48-203ENST00000613788 PDE2AO00408 941 aaPredicted RBP15□□□□□ -0.01
CD48-203ENST00000613788 SRPRAP08240 638 aaKnown RBP15□□□□□ -0.01
CD48-203ENST00000613788 GLDCP23378 1020 aa15□□□□□ -0.01
CD48-203ENST00000613788 STIP1P31948 543 aaKnown RBP15□□□□□ -0.01
CD48-203ENST00000613788 RENBPP51606 427 aa15□□□□□ -0.01
CD48-203ENST00000613788 STARD6P59095 220 aa15□□□□□ -0.01
CD48-203ENST00000613788 ST8SIA6P61647 398 aa15□□□□□ -0.01
CD48-203ENST00000613788 ARF5P84085 180 aa15□□□□□ -0.01
CD48-203ENST00000613788 SNX1Q13596 522 aa15□□□□□ -0.01
CD48-203ENST00000613788 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
CD48-203ENST00000613788 PRKD1Q15139 912 aaPredicted RBP15□□□□□ -0.01
CD48-203ENST00000613788 CYP1B1Q16678 543 aa15□□□□□ -0.01
CD48-203ENST00000613788 FBXO43Q4G163 708 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms