RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 LRRC4Q9HBW1 653 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 DNAJC16Q9Y2G8 782 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
CDH1-213ENST00000612417 PRR5-ARHGAP8B1AHC4 643 aa15□□□□□ -0.01
CDH1-213ENST00000612417 F5H423 210 aaPredicted RBP15□□□□□ -0.01
CDH1-213ENST00000612417 M0QZQ0 153 aa15□□□□□ -0.01
CDH1-213ENST00000612417 EEF2KO00418 725 aaKnown RBP15□□□□□ -0.01
CDH1-213ENST00000612417 ITM2AO43736 263 aa15□□□□□ -0.01
CDH1-213ENST00000612417 B4GALT3O60512 393 aa15□□□□□ -0.01
CDH1-213ENST00000612417 MYL4P12829 197 aa15□□□□□ -0.01
CDH1-213ENST00000612417 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
CDH1-213ENST00000612417 ALDH18A1P54886 795 aaKnown RBP15□□□□□ -0.01
CDH1-213ENST00000612417 MRPS35P82673 323 aaKnown RBP15□□□□□ -0.01
CDH1-213ENST00000612417 ARHGAP8P85298 464 aa15□□□□□ -0.01
CDH1-213ENST00000612417 DEUP1Q05D60 604 aa15□□□□□ -0.01
CDH1-213ENST00000612417 IFRD2Q12894 506 aaPredicted RBP15□□□□□ -0.01
CDH1-213ENST00000612417 RCN2Q14257 317 aa15□□□□□ -0.01
CDH1-213ENST00000612417 C16orf46Q6P387 395 aa15□□□□□ -0.01
CDH1-213ENST00000612417 CLEC20AQ6ZU45 233 aa15□□□□□ -0.01
CDH1-213ENST00000612417 FAM35AQ86V20 835 aa15□□□□□ -0.01
CDH1-213ENST00000612417 RASSF3Q86WH2 238 aa15□□□□□ -0.01
CDH1-213ENST00000612417 SIX6OS1Q8N1H7 587 aa15□□□□□ -0.01
CDH1-213ENST00000612417 CCNYQ8ND76 341 aa15□□□□□ -0.01
CDH1-213ENST00000612417 OR6Y1Q8NGX8 325 aa15□□□□□ -0.01
CDH1-213ENST00000612417 FAM136AQ96C01 138 aa15□□□□□ -0.01
CDH1-213ENST00000612417 SUSD3Q96L08 255 aa15□□□□□ -0.01
CDH1-213ENST00000612417 FAM161BQ96MY7 647 aa15□□□□□ -0.01
CDH1-213ENST00000612417 TMPRSS4Q9NRS4 437 aa15□□□□□ -0.01
CDH1-213ENST00000612417 PIGVQ9NUD9 493 aa15□□□□□ -0.01
CDH1-213ENST00000612417 LRCH1Q9Y2L9 728 aa15□□□□□ -0.01
CDH1-213ENST00000612417 SEC23IPQ9Y6Y8 1000 aaKnown RBP15□□□□□ -0.01
CDH1-213ENST00000612417 NCAM2O15394 837 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CREB3O43889 395 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 AP2A1O95782 977 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CYP11A1P05108 521 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 COL6A1P12109 1028 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CDC25CP30307 473 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 HCAR3P49019 387 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 RABGGTBP53611 331 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 PDE1BQ01064 536 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 TLE2Q04725 743 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 KDSRQ06136 332 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 THOC5Q13769 683 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 CCDC153Q494R4 210 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 TRIM60Q495X7 471 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 SYPL2Q5VXT5 272 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 PDZD4Q76G19 769 aaPredicted RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 TMEM135Q86UB9 458 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 COLGALT2Q8IYK4 626 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ULK2Q8IYT8 1036 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 SORT1Q99523 831 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 GORASP1Q9BQQ3 440 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ACBD6Q9BR61 282 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 FAM167BQ9BTA0 163 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 OSBPL1AQ9BXW6 950 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 LRRC40Q9H9A6 602 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 DNAJC28Q9NX36 388 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 SEPT10Q9P0V9 454 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 TXNDC16Q9P2K2 825 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 COPG2Q9UBF2 871 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 DNAJB4Q9UDY4 337 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 RPS6KL1Q9Y6S9 549 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 FNDC1Q4ZHG4 1894 aaPredicted RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 SHROOM3Q8TF72 1996 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 TTC3P53804 2025 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ERI2A8K979 691 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 LYPLA1O75608 230 aaPredicted RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 FBXO21O94952 628 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 KLHL2O95198 593 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 KCNA4P22459 653 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CYP2C18P33260 490 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ADRA1BP35368 520 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CPOXP36551 454 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 HARS2P49590 506 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 GATMP50440 423 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 SESN3P58005 492 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ACTR3P61158 418 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 IRX4P78413 519 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 DSC1Q08554 894 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 PPIDQ08752 370 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 ZRSR2Q15696 482 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 CAPRIN2Q6IMN6 1127 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 MICAL1Q8TDZ2 1067 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 PPP4R1Q8TF05 950 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 RBBP8Q99708 897 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 CEP41Q9BYV8 373 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 BRD8Q9H0E9 1235 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 ELAC1Q9H777 363 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 WDR6Q9NNW5 1121 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 PIH1D1Q9NWS0 290 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 SOX13Q9UN79 622 aa14.99□□□□□ -0.01
CDH1-213ENST00000612417 APOBEC2Q9Y235 224 aaKnown RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 COL4A4P53420 1690 aaPredicted RBP14.99□□□□□ -0.01
CDH1-213ENST00000612417 TADA2AO75478 443 aa14.98□□□□□ -0.01
CDH1-213ENST00000612417 CIB2O75838 187 aa14.98□□□□□ -0.01
CDH1-213ENST00000612417 USP1O94782 785 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms