RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FBXO6Q9NRD1 293 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SYBUQ9NX95 663 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 Q9Y3F1 56 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 STYXL1Q9Y6J8 313 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SLC4A7Q9Y6M7 1214 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 TRAV19A0A0A6YYK7 116 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 FAM95CA0A1B0GW59 222 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 A0A1W2PPM1 405 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SYNDIG1LA6NDD5 238 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 FOXO6A8MYZ6 492 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 TPP1O14773 563 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 HNRNPCL1O60812 293 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CLASP2O75122 1294 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 DDHD2O94830 711 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PCDH8O95206 1070 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 IGSF6O95976 241 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 WARSP23381 471 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 IL1R2P27930 398 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 MZF1P28698 734 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 ABL2P42684 1182 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 COPAP53621 1224 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 MTA1Q13330 715 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 BOP1Q14137 746 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 ANKRD22Q5VYY1 191 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 ARHGAP17Q68EM7 881 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CLEC20AQ6ZU45 233 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 OTOP3Q7RTS5 596 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CTU1Q7Z7A3 348 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 KIRREL3Q8IZU9 778 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 RAB42Q8N4Z0 105 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PCYOX1LQ8NBM8 494 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CPT1BQ92523 772 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CCDC126Q96EE4 140 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 ZMAT2Q96NC0 199 aaKnown RBP7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SDCBP2Q9H190 292 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PRDM16Q9HAZ2 1276 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 NMRAL1Q9HBL8 299 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PTPRHQ9HD43 1115 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 TAS2R13Q9NYV9 303 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 URB1O60287 2271 aaKnown RBP7.4□□□□□ -1.23
CSDE1-218ENST00000610726 TBC1D3BA6NDS4 549 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 TRPC5OSA6NMA1 111 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 EOMESO95936 686 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 HADHBP55084 474 aaKnown RBP7.4□□□□□ -1.23
CSDE1-218ENST00000610726 TRIM32Q13049 653 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 RASA2Q15283 850 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 TEX44Q53QW1 395 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 FUKQ8N0W3 1084 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 ICA1LQ8NDH6 482 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 NDNQ99608 321 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 ZDHHC6Q9H6R6 413 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 RIC8BQ9NVN3 520 aa7.4□□□□□ -1.23
CSDE1-218ENST00000610726 ARVCFO00192 962 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SYNCRIPO60506 623 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TBX18O95935 607 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 IGFBP4P22692 258 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SLC1A6P48664 564 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 NAGLUP54802 743 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ABCE1P61221 599 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 XRCC4Q13426 336 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SPDYCQ5MJ68 293 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ZC3H3Q8IXZ2 948 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF333Q96JL9 665 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 BTN2A3PQ96KV6 586 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 HAUS8Q9BT25 410 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 NFKBIZQ9BYH8 718 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 OSGEPL1Q9H4B0 414 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SLC40A1Q9NP59 571 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM161AQ9NX61 479 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ARMCX1Q9P291 453 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 PCDHB9Q9Y5E1 797 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 COL2A1P02458 1487 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 NRP1O14786 923 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 RNASEH1O60930 286 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CNMDO75829 334 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 GLUD1P00367 558 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SERPINE1P05121 402 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF7P17097 686 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SCTRP47872 440 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 GDF10P55107 478 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CORO7P57737 925 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SKOR1P84550 965 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC15Q0P6D6 951 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 PTP4A2Q12974 167 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 GALNT3Q14435 633 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 EML3Q32P44 896 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 C1orf220Q5T0J3 134 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CIR1Q86X95 450 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TDRD5Q8NAT2 981 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 RUBCNLQ9H714 662 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SLCO1B3Q9NPD5 702 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ANLNQ9NQW6 1124 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CREBZFQ9NS37 354 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms