RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 ST8SIA6P61647 398 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 TP53BP2Q13625 1128 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 TAF5Q15542 800 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 MAPRE1Q15691 268 aaKnown RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 TYSND1Q2T9J0 566 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 NEK5Q6P3R8 708 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 MIER2Q8N344 545 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 LRRC20Q8TCA0 184 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 KLHL32Q96NJ5 620 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 ASB2Q96Q27 587 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 GPR63Q9BZJ6 419 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 C6orf62Q9GZU0 229 aaPredicted RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 SPAG4Q9NPE6 437 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 VPS45Q9NRW7 570 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 POLG2Q9UHN1 485 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 PCDHB8Q9UN66 801 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 TCRBV9S1A1TA0A576 114 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 C5orf58C9J3I9 102 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 F9P00740 461 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 BPGMP07738 259 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CCNB1P14635 433 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CHRM3P20309 590 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CCNFP41002 786 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 PTGIRP43119 386 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 MAPK10P53779 464 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CDH17Q12864 832 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 NFIL3Q16649 462 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CCDC142Q17RM4 750 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 ASTE1Q2TB18 679 aaPredicted RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 GPR107Q5VW38 600 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 CCSAPQ6IQ19 270 aaPredicted RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 SDE2Q6IQ49 451 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 DDX53Q86TM3 631 aaKnown RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 FBXO16Q8IX29 292 aaPredicted RBP9.28□□□□□ -0.92
COL25A1-208ENST00000610288 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 FOPNLQ96NB1 174 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 RMND5AQ9H871 391 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 SYTL2Q9HCH5 934 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 C8orf4Q9NR00 106 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 KLHL3Q9UH77 587 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 RNF112Q9ULX5 631 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 RAP2CQ9Y3L5 183 aa9.28□□□□□ -0.92
COL25A1-208ENST00000610288 PXDNQ92626 1479 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 hCG_1818297A0A087WSY0 165 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 LINC00854A0A1B0GVQ3 168 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 C17orf102A2RUQ5 167 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 PTGES3LE9PB15 166 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 FAM20BO75063 409 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 TCEA3O75764 348 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 ZMPSTE24O75844 475 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 CCNKO75909 580 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 RBL1P28749 1068 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 HARS2P49590 506 aaKnown RBP9.27□□□□□ -0.92
COL25A1-208ENST00000610288 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.92
COL25A1-208ENST00000610288 SOX10P56693 466 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 PLIN5Q00G26 463 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 VAC14Q08AM6 782 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 RALGDSQ12967 914 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 ACSBG2Q5FVE4 666 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 PHF13Q86YI8 300 aaPredicted RBP9.27□□□□□ -0.92
COL25A1-208ENST00000610288 GATAD2AQ86YP4 633 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 ATG16L2Q8NAA4 619 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 GBA2Q9HCG7 927 aaPredicted RBP9.27□□□□□ -0.92
COL25A1-208ENST00000610288 PCDH12Q9NPG4 1184 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 TAS2R1Q9NYW7 299 aa9.27□□□□□ -0.92
COL25A1-208ENST00000610288 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.92
COL25A1-208ENST00000610288 EML1O00423 815 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 VPS4BO75351 444 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 MT-CO1P00395 513 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 GRIA3P42263 894 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 NAGLUP54802 743 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 ARHGEF7Q14155 803 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 ZRANB3Q5FWF4 1079 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 FAM45BPQ6NSW5 357 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 KBTBD2Q8IY47 623 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 UCMAQ8WVF2 138 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 SLC44A1Q8WWI5 657 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 DGCR6LQ9BY27 220 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 MST1RQ04912 1400 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 CYP3A7-CYP3A51PA0A087WV96 503 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 GNB5O14775 395 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 AXIN1O15169 862 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 VTNP04004 478 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 SNRPB2P08579 225 aaKnown RBP9.27□□□□□ -0.93
COL25A1-208ENST00000610288 CYP3A4P08684 503 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 ODC1P11926 461 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 CYP3A7P24462 503 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 RAP1GAPP47736 663 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
COL25A1-208ENST00000610288 CDC16Q13042 620 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 SQLEQ14534 574 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 METTL21CQ5VZV1 264 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 TMEM26Q6ZUK4 368 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 FAM131BQ86XD5 332 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 RAB42Q8N4Z0 105 aa9.27□□□□□ -0.93
COL25A1-208ENST00000610288 AMER2Q8N7J2 671 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms