RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 COL26A1Q96A83 441 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.28
USP6NL-205ENST00000609104 ZMPSTE24O75844 475 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 HNMTP50135 292 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 CDK7P50613 346 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 NR1D2Q14995 579 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 MAP10Q9P2G4 905 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 OGDHLQ9ULD0 1010 aa13.27□□□□□ -0.28
USP6NL-205ENST00000609104 BIRC5O15392 142 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 HMGCRP04035 888 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 INO80DQ53TQ3 878 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 TMC7Q7Z402 723 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 PCDHA11Q9Y5I1 949 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 SREBF2Q12772 1141 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 FAM187BQ17R55 369 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 POC5Q8NA72 575 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 RSPH9Q9H1X1 276 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 HPSEQ9Y251 543 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 PTPN3P26045 913 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 GDF3Q9NR23 364 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 SAE1Q9UBE0 346 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 STARP49675 285 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 BIKQ13323 160 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 TOP3AQ13472 1001 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-205ENST00000609104 VPS72Q15906 364 aa13.27□□□□□ -0.29
USP6NL-205ENST00000609104 PIGNO95427 931 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 GJB6O95452 261 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 NTRK1P04629 796 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 DNAJB14Q8TBM8 379 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 MTG1Q9BT17 334 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TKTL2Q9H0I9 626 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 CRADDP78560 199 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 FBXO10Q9UK96 956 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TRHDEQ9UKU6 1024 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 A0A0B4J269 797 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 H7C0S8 307 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 GAKO14976 1311 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 ECDO95905 644 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 NFKB1P19838 968 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TCEA2Q15560 299 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 SETMARQ53H47 684 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TAF8Q7Z7C8 310 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 RHBGQ9H310 441 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 XPNPEP3Q9NQH7 507 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 MTRF1O75570 445 aaKnown RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 GPAT3Q53EU6 434 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 NET1Q7Z628 596 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TTC7BQ86TV6 843 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 IKZF3Q9UKT9 509 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 LIN7AO14910 233 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 SHBGP04278 402 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 USP46P62068 366 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TIMM50Q3ZCQ8 353 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TINF2Q9BSI4 451 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 RNF17Q9BXT8 1623 aaKnown RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 ASB2Q96Q27 587 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 ADCY6O43306 1168 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 PLOD3O60568 738 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 MTAPQ13126 283 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 FAM126AQ9BYI3 521 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 AP5Z1O43299 807 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 CCDC185Q8N715 623 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
USP6NL-205ENST00000609104 SMPD4Q9NXE4 827 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 KCNK4Q9NYG8 393 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 KLQ9UEF7 1012 aa13.26□□□□□ -0.29
USP6NL-205ENST00000609104 ANKDD1BA6NHY2 528 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ZCCHC9Q8N567 271 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 IL2P60568 153 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ZDHHC17Q8IUH5 632 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 DNAJB3Q8WWF6 145 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ALG9Q9H6U8 611 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 FAM237BA0A1B0GVD1 139 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 RBAK-RBAKDNI3L0D1 243 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ITIH5Q86UX2 942 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 C2CD2Q9Y426 696 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SNCAIPQ9Y6H5 919 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SNRPB2P08579 225 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 RBL1P28749 1068 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms