RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PLEKHA8P1O95397 391 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ACSL3O95573 720 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CRTAMO95727 393 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 LDHAP00338 332 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 FSHBP01225 129 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 NTRK1P04629 796 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CYP1A2P05177 515 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RSPH10BP0C881 870 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SRGAP2CP0DJJ0 459 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RBP3P10745 1247 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 HSPA8P11142 646 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 FGFR1P11362 822 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT13P13646 458 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 IFNGR1P15260 489 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CA4P22748 312 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PMLP29590 882 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ACADSBP45954 432 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RXRGP48443 463 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MXI1P50539 228 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 GPC3P51654 580 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CTAG1AP78358 180 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 GALNT2Q10471 571 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 WASHC5Q12768 1159 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCNIQ14094 377 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPP2R5DQ14738 602 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 C16orf72Q14CZ0 275 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSMD6Q15008 389 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TNIP1Q15025 636 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARHGEF6Q15052 776 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 OXA1LQ15070 435 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNJ8Q15842 424 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PKN2Q16513 984 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DGKDQ16760 1214 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCTD21Q4G0X4 260 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SBK1Q52WX2 424 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF394Q53GI3 561 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM26FQ5R3K3 315 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 STXBP5Q5T5C0 1151 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCNJQ5T5M9 372 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 AGAP7PQ5VUJ5 663 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SIGIRRQ6IA17 410 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPP4R4Q6NUP7 873 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MIER3Q7Z3K6 550 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DGKHQ86XP1 1220 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF354CQ86Y25 554 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCP2Q8IU60 420 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PQLC1Q8N2U9 271 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 FBXW8Q8N3Y1 598 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TSPAN14Q8NG11 270 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 UHMK1Q8TAS1 419 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TBC1D15Q8TC07 691 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RASSF5Q8WWW0 418 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DLG3Q92796 817 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CMTM5Q96DZ9 223 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DUS3LQ96G46 650 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCUN1D1Q96GG9 259 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF496Q96IT1 587 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 CDK5RAP3Q96JB5 506 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNK16Q96T55 309 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 YME1L1Q96TA2 773 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TUBA1CQ9BQE3 449 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MRPL1Q9BYD6 325 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCLK3Q9C098 648 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PAIP1Q9H074 479 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 WWP1Q9H0M0 922 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 GOLPH3Q9H4A6 298 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PDZD7Q9H5P4 517 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 BCAS3Q9H6U6 928 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 GP6Q9HCN6 339 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MLXIPLQ9NP71 852 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARMC1Q9NVT9 282 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 BARHL2Q9NY43 387 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 IL20Q9NYY1 176 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 NCKIPSDQ9NZQ3 722 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANKMY1Q9P2S6 941 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRPF19Q9UMS4 504 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PLA2G2DQ9UNK4 145 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TDRKHQ9Y2W6 561 aaKnown RBP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 RWDD3Q9Y3V2 267 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 AP4S1Q9Y587 144 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 NOX1Q9Y5S8 564 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SF3B1O75533 1304 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPATA31A6Q5VVP1 1343 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYO3BQ8WXR4 1341 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 UBR1Q8IWV7 1749 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 TOGARAM1Q9Y4F4 1720 aa4.18□□□□□ -1.74
HMGB1P50-201ENST00000605814 PLCH1Q4KWH8 1693 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SCN4AP35499 1836 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 A0A087WXM4 84 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 LOC105371267A0A1B0GV96 52 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 EXOC1LA0A1B0GW35 172 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SDR42E2A6NKP2 422 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PP2D1A8MPX8 630 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 F5H6K3 240 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 hCG_1984214I3L0E3 225 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 RNF103O00237 685 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms