RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 FTCDO95954 541 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ITGB6P18564 788 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 TNNI3P19429 210 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 GSTM2P28161 218 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 NMT1P30419 496 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 GTF2H1P32780 548 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 GABRB2P47870 512 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 SERPINB9P50453 376 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 CLCNKAP51800 687 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ERVK-21P61565 698 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 HTRA3P83110 453 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 PMP22Q01453 160 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ZP2Q05996 745 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 RCN2Q14257 317 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 CES4AQ5XG92 561 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 PSRC1Q6PGN9 363 aaPredicted RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 BLOC1S2Q6QNY1 142 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ERMP1Q7Z2K6 904 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ZC3H18Q86VM9 953 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 NME9Q86XW9 330 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 LNX2Q8N448 690 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 TMIEQ8NEW7 156 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 BBS10Q8TAM1 723 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 MRPS27Q92552 414 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 GDAP1L1Q96MZ0 367 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 FAM111AQ96PZ2 611 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 P2RX7Q99572 595 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 ACO2Q99798 780 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 TREX2Q9BQ50 279 aaPredicted RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 EFHD1Q9BUP0 239 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 TRIM54Q9BYV2 358 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 SLC52A2Q9HAB3 445 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 NOD2Q9HC29 1040 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 NOP53Q9NZM5 478 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 VPS9D1Q9Y2B5 631 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 MRPS7Q9Y2R9 242 aaKnown RBP5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 MAD1L1Q9Y6D9 718 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 TONSLQ96HA7 1378 aa5.94□□□□□ -1.46
COL4A3BP-207ENST00000604926 NT5C1B-RDH14C9J2C7 533 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 FZD9O00144 591 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 NEMP1O14524 444 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CXCL11O14625 94 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 KIAA0391O15091 583 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CYTIPO60759 359 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 MYO1DO94832 1006 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 AFPP02771 609 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 KRT3P12035 628 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 HK1P19367 917 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SP100P23497 879 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TNFSF4P23510 183 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 GALK1P51570 392 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CCR4P51679 360 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 STAT2P52630 851 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 MAPK10P53779 464 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 HNRNPKP61978 463 aaKnown RBP eCLIP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 DSC1Q08554 894 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 ABRQ12979 859 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CHAF1BQ13112 559 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 RPA4Q13156 261 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TPD52L1Q16890 204 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 C6orf15Q6UXA7 325 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 PEX26Q7Z412 305 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 DPP10Q8N608 796 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CPSF7Q8N684 471 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TRPV3Q8NET8 790 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 ADCY4Q8NFM4 1077 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 OR52M1Q8NGK5 317 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 AGAP11Q8TF27 550 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 WFDC12Q8WWY7 111 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 MED15Q96RN5 788 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CTRCQ99895 268 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SPXQ9BT56 116 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TEX12Q9BXU0 123 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 DDX4Q9NQI0 724 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 RXFP3Q9NSD7 469 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TDP1Q9NUW8 608 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SMPD3Q9NY59 655 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 DIMT1Q9UNQ2 313 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 PCDHA5Q9Y5H7 936 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 LAMB4A4D0S4 1761 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 CFAP99D6REC4 459 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SOCS6O14544 535 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 POLR1CO15160 346 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 PTP4A3O75365 173 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 GALTP07902 379 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SPATA31D3P0C874 917 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 RALAP11233 206 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 TNFRSF8P28908 595 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 AKT1P31749 480 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 GPC1P35052 558 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 GSTM5P46439 218 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SLC11A1P49279 550 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 ZNF165P49910 485 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 LUMP51884 338 aaPredicted RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SRP54P61011 504 aaKnown RBP5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 FAM189A2Q15884 450 aa5.93□□□□□ -1.46
COL4A3BP-207ENST00000604926 SPOPLQ6IQ16 392 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms