RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ATP13A1Q9HD20 1204 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 ZNF148Q9UQR1 794 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 NEU2Q9Y3R4 380 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 BCLAF3A2AJT9 711 aaKnown RBP23.44■■□□□ 1.34
IRF3-227ENST00000600911 TTI1O43156 1089 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 CHRNA3P32297 505 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 KDSRQ06136 332 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 WASHC5Q12768 1159 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 ITPRIPL2Q3MIP1 535 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 IL31Q6EBC2 164 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 LINGO4Q6UY18 593 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 ADIPOR2Q86V24 386 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 ZNF354CQ86Y25 554 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 MMGT1Q8N4V1 131 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 ALLCQ8N6M5 410 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 FAM71DQ8N9W8 422 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 USP33Q8TEY7 942 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 TRIM51Q9BSJ1 452 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 PCYOX1Q9UHG3 505 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 VPS51Q9UID3 782 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 GGA2Q9UJY4 613 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 RAD54BQ9Y620 910 aa23.44■■□□□ 1.34
IRF3-227ENST00000600911 MUC22E2RYF6 1773 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 ARHGAP42A6NI28 874 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 PPP1R12AO14974 1030 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 KCNN4O15554 427 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 SLU7O95391 586 aaKnown RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 ITGAVP06756 1048 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 FNTAP49354 379 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 CLCN6P51797 869 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 TRIP13Q15645 432 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 PITRM1Q5JRX3 1037 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 TXNDC11Q6PKC3 985 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 ADHFE1Q8IWW8 467 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 CCDC13Q8IYE1 715 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 CCDC105Q8IYK2 499 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 CCDC114Q96M63 670 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 TSGA13Q96PP4 275 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 FRMD8P1Q9BZ68 369 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 EPC1Q9H2F5 836 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 KIAA1522Q9P206 1035 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 IGSF9Q9P2J2 1179 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.43■■□□□ 1.34
IRF3-227ENST00000600911 VPS28Q9UK41 221 aa23.43■■□□□ 1.34
IRF3-227ENST00000600911 DRG1Q9Y295 367 aaKnown RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 V9GYY5 206 aaPredicted RBP23.43■■□□□ 1.34
IRF3-227ENST00000600911 TRIOO75962 3097 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 ZSCAN5CA6NGD5 496 aaPredicted RBP23.42■■□□□ 1.34
IRF3-227ENST00000600911 SHISA7A6NL88 538 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 KDELR3O43731 214 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 PRAMEF11O60813 436 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 MT-CO1P00395 513 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 PABPC1P11940 636 aaKnown RBP23.42■■□□□ 1.34
IRF3-227ENST00000600911 MX2P20592 715 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 DGKGP49619 791 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.42■■□□□ 1.34
IRF3-227ENST00000600911 MNS1Q8NEH6 495 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 HTR3CQ8WXA8 447 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 SORCS1Q8WY21 1168 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 NXPE3Q969Y0 559 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 HEBP1Q9NRV9 189 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 SEPT10Q9P0V9 454 aa23.42■■□□□ 1.34
IRF3-227ENST00000600911 HACD1B0YJ81 288 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 PRRT4C9JH25 899 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 CBX4O00257 560 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 CCNCP24863 283 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 PLK1P53350 603 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 SLC7A5Q01650 507 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 SLC10A7Q0GE19 358 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 ZNF783Q6ZMS7 281 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 CDKL3Q8IVW4 592 aaPredicted RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 ATL2Q8NHH9 583 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 HOMER3Q9NSC5 361 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 FAM50BQ9Y247 325 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 ATG2BQ96BY7 2078 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 SGK1O00141 431 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 NCAM2O15394 837 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 PTPN3P26045 913 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 OXCT1P55809 520 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 NAA30Q147X3 362 aaPredicted RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 BZW1Q7L1Q6 419 aaKnown RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 JAMLQ86YT9 394 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 TAB3Q8N5C8 712 aaPredicted RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 CNTD1Q8N815 330 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 DCAF4L2Q8NA75 395 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 CCDC110Q8TBZ0 833 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 EZH1Q92800 747 aaPredicted RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 XPO6Q96QU8 1125 aaKnown RBP23.41■■□□□ 1.34
IRF3-227ENST00000600911 SLC2A11Q9BYW1 496 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 SP110Q9HB58 689 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 DONSONQ9NYP3 566 aa23.41■■□□□ 1.34
IRF3-227ENST00000600911 F5H423 210 aaPredicted RBP23.4■■□□□ 1.34
IRF3-227ENST00000600911 K7ERQ8 282 aa23.4■■□□□ 1.34
IRF3-227ENST00000600911 MUSKO15146 869 aa23.4■■□□□ 1.34
IRF3-227ENST00000600911 GJB3O75712 270 aa23.4■■□□□ 1.34
IRF3-227ENST00000600911 BMP1P13497 986 aa23.4■■□□□ 1.34
IRF3-227ENST00000600911 STK19P49842 368 aaPredicted RBP23.4■■□□□ 1.34
IRF3-227ENST00000600911 IL10RBQ08334 325 aa23.4■■□□□ 1.34
IRF3-227ENST00000600911 HEATR6Q6AI08 1181 aaKnown RBP23.4■■□□□ 1.34
IRF3-227ENST00000600911 PGBD5Q8N414 524 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms