RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TMBIM4Q9HC24 238 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ARHGAP26Q9UNA1 814 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 OBSL1O75147 1896 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 CCDC195A0A1B0GUA6 201 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 A0A1B0GVM2 712 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 TCAF2A6NFQ2 919 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 NRG2O14511 850 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 CACNG3O60359 315 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 TSPAN3O60637 253 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 MOSPD3O75425 235 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 IL10RBQ08334 325 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 DUSP6Q16828 381 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 CCDC38Q502W7 563 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 HP1BP3Q5SSJ5 553 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 STXBP5Q5T5C0 1151 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 C6orf118Q5T5N4 469 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 SETD3Q86TU7 594 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 USP33Q8TEY7 942 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 NSMCE1Q8WV22 266 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 ARHGEF2Q92974 986 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 TCEAL4Q96EI5 215 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 PPP1R2P1Q96PQ5 205 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 CCDC77Q9BR77 488 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 SP110Q9HB58 689 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 LRRC4CQ9HCJ2 640 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 RBM22Q9NW64 420 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 CFAP97Q9P2B7 532 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 ZMYM5Q9UJ78 669 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 DOCK4Q8N1I0 1966 aa18.02■□□□□ 0.48
SHKBP1-224ENST00000600718 A0A087WUV0 522 aaPredicted RBP18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF197O14709 1029 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 NFKB1P19838 968 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 MAGEA3P43357 314 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 IFNAR2P48551 515 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 GNA12Q03113 381 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 TEAD2Q15562 447 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 LRRC8BQ6P9F7 803 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF354CQ86Y25 554 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 PALM2Q8IXS6 379 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 CMTM8Q8IZV2 173 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 FBXO36Q8NEA4 188 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 GLOD4Q9HC38 313 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 TBC1D30Q9Y2I9 924 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 TEX264Q9Y6I9 313 aa18.02■□□□□ 0.47
SHKBP1-224ENST00000600718 ILVBLA1L0T0 632 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 GOLGA6CA6NDK9 693 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 F5H423 210 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 J3KR12 359 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 LEFTY2O00292 366 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 GFRA2O00451 464 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 RNF40O75150 1001 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 BANF1O75531 89 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 NEBLO76041 1014 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 SUN1O94901 812 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 AP2A1O95782 977 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 PEX11BO96011 259 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 GOLGA6DP0CG33 693 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 ELK3P41970 407 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 SGSHP51688 502 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 STAT4Q14765 748 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 KRT71Q3SY84 523 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF534Q76KX8 674 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 KLHDC8BQ8IXV7 354 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 ATP11CQ8NB49 1132 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 HJURPQ8NCD3 748 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 ARL8AQ96BM9 186 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF707Q96C28 371 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 TMA16Q96EY4 203 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 FCRL5Q96RD9 977 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 GOLGA6AQ9NYA3 693 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 NUP205Q92621 2012 aa18.01■□□□□ 0.47
SHKBP1-224ENST00000600718 TYW5A2RUC4 315 aaKnown RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 AVILO75366 819 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 TCEA3O75764 348 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 PAPLNO95428 1278 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 PHBP35232 272 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 ACVRL1P37023 503 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 AVPR1AP37288 418 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 PRSS36Q5K4E3 855 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 MARC1Q5VT66 337 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 KCTD11Q693B1 232 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 CPXM2Q8N436 756 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 CDCA3Q99618 268 aaPredicted RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 GORASP1Q9BQQ3 440 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 PSD3Q9NYI0 1048 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 AAR2Q9Y312 384 aaKnown RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 E2F8A0AVK6 867 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 RASGRF2O14827 1237 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 POLR3GO15318 223 aaPredicted RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 PRAMEF11O60813 436 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 RHOCP08134 193 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 NRIP1P48552 1158 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 TNK2Q07912 1038 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF783Q6ZMS7 281 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms