RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CCDC105Q8IYK2 499 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 FLCNQ8NFG4 579 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 LRRN4Q8WUT4 740 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 HAUS1Q96CS2 278 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 MRGPRX3Q96LB0 322 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 C16orf45Q96MC5 204 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 ACOX2Q99424 681 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 NAPGQ99747 312 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 LMAN1LQ9HAT1 526 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 PRDM16Q9HAZ2 1276 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 SNX12Q9UMY4 172 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 STARD13Q9Y3M8 1113 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 HEY1Q9Y5J3 304 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 ARHGAP42A6NI28 874 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 CBX4O00257 560 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 STK25O00506 426 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 KDELR3O43731 214 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 CEP104O60308 925 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 RNF40O75150 1001 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 CD160O95971 181 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 TGM2P21980 687 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 TIE1P35590 1138 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 ETFBP38117 255 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 STK19P49842 368 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 KLF1Q13351 362 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 PKN3Q6P5Z2 889 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 LINGO4Q6UY18 593 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 LEKR1Q6ZMV7 388 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 Q6ZS52 159 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 ZNF354CQ86Y25 554 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 SLC13A5Q86YT5 568 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 PJA1Q8NG27 643 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 COG1Q8WTW3 980 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 MYO19Q96H55 970 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 OSBPL9Q96SU4 736 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 NELL2Q99435 816 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 PDFQ9HBH1 243 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 ERVW-1Q9UQF0 538 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 MUC22E2RYF6 1773 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 ATG2BQ96BY7 2078 aa20.46■□□□□ 0.87
SHKBP1-222ENST00000600320 J3KR12 359 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 TIMM44O43615 452 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 MT-CO1P00395 513 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 ASLP04424 464 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 DLDP09622 509 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 ECT2LQ008S8 904 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 FBXO43Q4G163 708 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 DGKKQ5KSL6 1271 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 PAPD7Q5XG87 772 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 NUDT18Q6ZVK8 323 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 USP33Q8TEY7 942 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 RPL10LQ96L21 214 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 OLFM3Q96PB7 478 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 C2orf49Q9BVC5 232 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 MFSD1Q9H3U5 465 aa20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 THAP10Q9P2Z0 257 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 IPO11Q9UI26 975 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-222ENST00000600320 CTAGE9A4FU28 777 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 APOC4-APOC2K7ER74 178 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 K7ERQ8 282 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ZNF185O15231 689 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 PI15O43692 258 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 PRAMEF11O60813 436 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 TJP3O95049 919 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 APOC2P02655 101 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ATP5BP06576 529 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 GARSP41250 739 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 SULT2A1Q06520 285 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 GAS6Q14393 721 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ZNF234Q14588 700 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 C2orf27AQ580R0 203 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 B4GALNT4Q76KP1 1039 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ADAT2Q7Z6V5 191 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ZNF513Q8N8E2 541 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 UCMAQ8WVF2 138 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 ACDQ96AP0 544 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 MS4A14Q96JA4 679 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 PBKQ96KB5 322 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 FAM118BQ9BPY3 351 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 OSBPL6Q9BZF3 934 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 SMARCAL1Q9NZC9 954 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 SLCO3A1Q9UIG8 710 aa20.44■□□□□ 0.86
SHKBP1-222ENST00000600320 MYO18AQ92614 2054 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 WASH3PC4AMC7 463 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 MAFKO60675 156 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 HNRNPLP14866 589 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 IL12RB1P42701 662 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 WASP42768 502 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 MRPS21P82921 87 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 LRRC32Q14392 662 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 CCDC181Q5TID7 509 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 ATPAF2Q8N5M1 289 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 ALLCQ8N6M5 410 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 RPLP0P6Q8NHW5 317 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 ACTL9Q8TC94 416 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 CLDN23Q96B33 292 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 SP110Q9HB58 689 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 POLR3BQ9NW08 1133 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 CACNA2D2Q9NY47 1150 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms