RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 KLK7P49862 253 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 CLCN6P51797 869 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 COPB1P53618 953 aaKnown RBP16.21■□□□□ 0.19
VRK3-221ENST00000600284 C21orf59P57076 290 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 FMO1Q01740 532 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 STX1AQ16623 288 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 TRNP1Q6NT89 227 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.21■□□□□ 0.19
VRK3-221ENST00000600284 ZNF783Q6ZMS7 281 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 DCAF4L2Q8NA75 395 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 KDF1Q8NAX2 398 aaPredicted RBP16.21■□□□□ 0.19
VRK3-221ENST00000600284 BAHD1Q8TBE0 780 aaPredicted RBP16.21■□□□□ 0.19
VRK3-221ENST00000600284 SLC20A1Q8WUM9 679 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 ADAMTS14Q8WXS8 1223 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 GATA6Q92908 595 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 CCDC114Q96M63 670 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 CFAP57Q96MR6 1250 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 PSMB7Q99436 277 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 EBF2Q9HAK2 575 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 NLRC4Q9NPP4 1024 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
VRK3-221ENST00000600284 CACNA1BQ00975 2339 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 KMT2BQ9UMN6 2715 aaPredicted RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3DA0A087WVF3 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3IA0A087WXS9 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3EA0A087X179 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3KA0A087X1G2 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 CXorf51AA0A1B0GTR3 108 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3FA6NER0 549 aaPredicted RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3LB9A6J9 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 LATO43561 262 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 PLRG1O43660 514 aaKnown RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 MBD3O95983 291 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3HP0C7X1 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 FTH1P19P0C7X4 201 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 SRCP12931 536 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 CHRNB2P17787 502 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 CD38P28907 300 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 OR1E1P30953 314 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 NUMBP49757 651 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 CCT8P50990 548 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 NRG1Q02297 640 aaPredicted RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 SLC20A2Q08357 652 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 CCDC15Q0P6D6 951 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 ARL13BQ3SXY8 428 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3GQ6DHY5 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3CQ6IPX1 549 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TBC1D3Q8IZP1 549 aaPredicted RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 ATP11CQ8NB49 1132 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 TMIEQ8NEW7 156 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 PIP4K2CQ8TBX8 421 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 RHBDD1Q8TEB9 315 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 ZYG11BQ9C0D3 744 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 METTL5Q9NRN9 209 aaKnown RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 VPS51Q9UID3 782 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 SARDHQ9UL12 918 aa16.2■□□□□ 0.18
VRK3-221ENST00000600284 MAP1BP46821 2468 aaKnown RBP16.2■□□□□ 0.18
VRK3-221ENST00000600284 LGALS16A8MUM7 142 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 H0Y8X5 98 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 EPHB6O15197 1021 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 UNGP13051 313 aaPredicted RBP16.19■□□□□ 0.18
VRK3-221ENST00000600284 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
VRK3-221ENST00000600284 SDC4P31431 198 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
VRK3-221ENST00000600284 SYCP1Q15431 976 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 KCNT1Q5JUK3 1230 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 ARTNQ5T4W7 220 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 Q6ZVU0 165 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 PRPF39Q86UA1 669 aaKnown RBP16.19■□□□□ 0.18
VRK3-221ENST00000600284 FAM131BQ86XD5 332 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 CHCHD4Q8N4Q1 142 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 SLC6A18Q96N87 628 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 ERGIC2Q96RQ1 377 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 TMPRSS4Q9NRS4 437 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 MPP6Q9NZW5 540 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 ZNF212Q9UDV6 495 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 DMTF1Q9Y222 760 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 SNX10Q9Y5X0 201 aa16.19■□□□□ 0.18
VRK3-221ENST00000600284 A0A0D9SEW6 157 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 A0A1B0GTQ1 180 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 A0A1W2PR77 199 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 C2CD4BA6NLJ0 364 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 SNAP91O60641 907 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 KRT37O76014 449 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 MT-CO1P00395 513 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 ADRA1BP35368 520 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 GRK6P43250 576 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 PTPN9P43378 593 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 NSFP46459 744 aaKnown RBP16.18■□□□□ 0.18
VRK3-221ENST00000600284 ATP11AP98196 1134 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 UBXN1Q04323 297 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 INAVAQ3KP66 663 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 CCDC14Q49A88 953 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 RETSATQ6NUM9 610 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms